Gene Pnec_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0479 
Symbol 
ID6183139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp425442 
End bp425837 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content45% 
IMG OID641671162 
Productprotein of unknown function DUF81 
Protein accessionYP_001797359 
Protein GI171463246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAA TCCAATCCAA AATATCTTCC AACTGGCAAG CATTGCAAAT TTCAACCATT 
AGCGTTGGCG CTGTAATTGA TGTTCTAGTA ACAGTCTCAT CAATCGGCGC TGGAGCCATC 
GGGACAACCT TGATTTTGTT GCTATATCCA CATCTCAAGG CATCAGAAGT TGCCGGCACT 
GATATAGCTT ATGCAGTCCC GCTCACAGCG CTAGCAGGAT TGGGTCACTG GTGGCTTGGT 
AACGTTCACT TTGACCTCTT GTTTGGATTA TTACTTGGCT CAGTTCCTGC CATATGGTTG 
GGAGCGAAAC TTTCTAGCAC TCTTTCAGAG AAAGCCACAA GAACAACGCT CGCTGGAACC 
TTATTTTTAG TGGGAATTAA GTTGGTTTCA TCATGA
 
Protein sequence
MDSIQSKISS NWQALQISTI SVGAVIDVLV TVSSIGAGAI GTTLILLLYP HLKASEVAGT 
DIAYAVPLTA LAGLGHWWLG NVHFDLLFGL LLGSVPAIWL GAKLSSTLSE KATRTTLAGT 
LFLVGIKLVS S