Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0442 |
Symbol | |
ID | 6184464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 394611 |
End bp | 394988 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641671132 |
Product | protein of unknown function DUF498 |
Protein accession | YP_001797329 |
Protein GI | 171463216 |
COG category | [S] Function unknown |
COG ID | [COG3737] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.268607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAGCTTC AATCTGACCC CCATTCCGGA GCGAATACGA TCACTGGCTA CGGCGATGGC TACGTAGAGA TCAACATGAC TCCCTACGCC CATGCTGTTG TCCTCAGCTC GGATGGCGCA ATCTCTCAAT GGTCTGCTCA GACATTTGAC GACTTAGAAG CCCATCACTT TGCGCAACTC GTTGATTTAA AACCAGAATT AATCCTTATT GGGACAGGCA GCCGACAGCA TTTTCCCACG CCAGAGCTCC TCAAAGTCTT GATTGCCGCC AAAATTGGCT TCGAAATCAT GGATTCCCAA GCCGCATGCC GGACTTACAA CATTTTGGTA GGCGAAGGAC GCCAAGTCCT TTTGGCCCTG ATTGTGGAGC CCATTTAA
|
Protein sequence | MKLQSDPHSG ANTITGYGDG YVEINMTPYA HAVVLSSDGA ISQWSAQTFD DLEAHHFAQL VDLKPELILI GTGSRQHFPT PELLKVLIAA KIGFEIMDSQ AACRTYNILV GEGRQVLLAL IVEPI
|
| |