Gene Pnec_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0442 
Symbol 
ID6184464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp394611 
End bp394988 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content50% 
IMG OID641671132 
Productprotein of unknown function DUF498 
Protein accessionYP_001797329 
Protein GI171463216 
COG category[S] Function unknown 
COG ID[COG3737] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.268607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCTTC AATCTGACCC CCATTCCGGA GCGAATACGA TCACTGGCTA CGGCGATGGC 
TACGTAGAGA TCAACATGAC TCCCTACGCC CATGCTGTTG TCCTCAGCTC GGATGGCGCA
ATCTCTCAAT GGTCTGCTCA GACATTTGAC GACTTAGAAG CCCATCACTT TGCGCAACTC
GTTGATTTAA AACCAGAATT AATCCTTATT GGGACAGGCA GCCGACAGCA TTTTCCCACG
CCAGAGCTCC TCAAAGTCTT GATTGCCGCC AAAATTGGCT TCGAAATCAT GGATTCCCAA
GCCGCATGCC GGACTTACAA CATTTTGGTA GGCGAAGGAC GCCAAGTCCT TTTGGCCCTG
ATTGTGGAGC CCATTTAA
 
Protein sequence
MKLQSDPHSG ANTITGYGDG YVEINMTPYA HAVVLSSDGA ISQWSAQTFD DLEAHHFAQL 
VDLKPELILI GTGSRQHFPT PELLKVLIAA KIGFEIMDSQ AACRTYNILV GEGRQVLLAL
IVEPI