Gene Pnec_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0339 
Symbol 
ID6183119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp301809 
End bp302729 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content40% 
IMG OID641671046 
ProductMethyltransferase type 12 
Protein accessionYP_001797245 
Protein GI171463132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.568595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.124479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCA ATCAATACCT CTCTAGGCAT TGCCCTATAT GTCAAAAAAA TACCAAAATC 
ACTTTGGAGG TTTCTTCTGA GATGCGTGCT GAAGATTTGG GGTATGAAGA ATTAACGCCT 
TATTGGAACG GCTTTTTTAA AGAGAAATTA TTTTTCTCAT ATGCTAGATG CGGTGAATGT 
GAGCTGCTGT TTGCCCCTAT CTTTTACCGC CCCGATCAAT TGGAGTCGCT TTACGGGCAA 
ATGCCTCCTA ATATGGACTT GGTCCCAATT CAAGCTCTTC TGAAGACGCA AAGAGGATAC 
TTTCGCGAAT TGAAGAATTA CTCCTCTCTG GATGAGGGGT ATATAGAAAT TGGGCCAGAC 
ATTGGTATTT TCACTATCAA CTGCAGTAAA GAGGGAAAAT TTGATCATTA CTGGTTGTGT 
GAGCCCAATA AGGAGGTTGC AAGTGCATTA GCTGCATCTG TCAACGGTAA CCCCTTCACC 
ATTATTGAAG ATATGTTCGG TTTTTCTGCT ATCCCTAATG GAAGTGCAAA TGTTGCGGTG 
ATGATTCAAG TGCTTGATCA TCTTTTGGAT CCAGTGGCGA CCCTATCGGA ATTAAGAGAA 
AAATGTCTTC CAGGTGGCAA GCTTTTATTG GTTACACATA ATGAGCAGTC TTTGCTTAGA 
AAGATTGTGG GGTGGAGATG GCCAGCGTTT TGTTTGCAGC ATCCACAGAT TTACAATCCA 
AAGTCTATAA CAAGGCTTTT AGAGCAATCA GGGTATAAGG TAGATTCAAT TAAAAGAACG 
ACTAATTATT TCCAGTTTAG CTTCCTTTTG AAGCACTTAT TGTGGGTGTT TGGCATTAAA 
GTTAAATCTG TACCAAAGAT TTTTGATTTC ACAATTGGCC TCAAGCTGGG GAATATCATA 
ACCATTGCTA CCCCGAAATA A
 
Protein sequence
MQSNQYLSRH CPICQKNTKI TLEVSSEMRA EDLGYEELTP YWNGFFKEKL FFSYARCGEC 
ELLFAPIFYR PDQLESLYGQ MPPNMDLVPI QALLKTQRGY FRELKNYSSL DEGYIEIGPD 
IGIFTINCSK EGKFDHYWLC EPNKEVASAL AASVNGNPFT IIEDMFGFSA IPNGSANVAV 
MIQVLDHLLD PVATLSELRE KCLPGGKLLL VTHNEQSLLR KIVGWRWPAF CLQHPQIYNP 
KSITRLLEQS GYKVDSIKRT TNYFQFSFLL KHLLWVFGIK VKSVPKIFDF TIGLKLGNII 
TIATPK