Gene Pnec_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0316 
Symbol 
ID6184006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp283384 
End bp284703 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content47% 
IMG OID641671024 
Producthypothetical protein 
Protein accessionYP_001797223 
Protein GI171463110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAGTTA CTCAGACTAC TTCGGATGGT TCTGGCAATT TTTCCGTAAA AGTGCCGGCC 
AACCCAGCTA ACACTTCTAG TAACCCGATT ATTTACTACG CTGTTGCAAG TAAGTCTCCC 
AGTATTGTGC TCATGGCAAG CTTGGGTATA GGTCCAATAT CGTCCGTACA TATCAATGAG 
CTCACGATGG TGGCGTCTGC ATATGCTTTT GCGCAATTAT TTCGCAACGA TTATTCAGTT 
GGGGGCAGCG CTCTTTCATT AAGTATTGCA GCAGGTATGG CAGAGAATTT AGTTTCTGCG 
CAATCGGGTT CTGCGTCCAC TATCATTCAA ACTTCGCCTA ATGGATATGA AACCAATACT 
TGGAGTGCGC TTGGCACCCT GGCCAACGTC TTGGCCGGCT GCACTCAAGG AGTGGCTAAT 
GCCTGTACTA ATTTATTTGC GTTAACACCC TCTTCGAATG GCATTACACC TACCAATACC 
TTACAAGCCA TTGTCAATAT TGCTTTAAAC TCTGCAGTCA ATGTCAGCGA TATTTATAAT 
TTAGGTAGTG TGGTTACAAG TTATACCCCT GCACTCACTG CGAATCAGGG CCCCAACTCT 
TCAGCGCCTC TACAAAAGCT CGATGCTTGG ACTATGGCGG TGGAGGTCAA TAACAGTGGT 
AGCAGTAGCT GCCCTTTTGG CGGCCCAGCC AATGTTGCCT TTGATGTCAA TGGCTATGAT 
GGCGGAATTT CAAAGTTATT TACAGTCTCA TTACCAAGTG GCAGCAATCC AAAAGGAGTG 
GCAGTAGATT CATTAGGTAA TGCCTGGGTC GCTGCCGGCG CAATTTCTAC GGTTTATGCG 
ATTAATACTA GCGGCACCAT TGTGGGAACC TACACCGGAC AAGGAATTAA TGGTCCATGG 
GGCGTTTCAT TGGATGCTAA AGGCAATGTC TGGGTTGCTA ATTTTGGCGT AAGCCTACCG 
AGCGCTCGTT ACAGTGTTGT GCAGCTCTGT GGTGCAACTG GAAATTGTCC CTATGGTGTC 
TCAATGGGCA GCGCAATTAC CCCAAGCACC GGTTACATAT TGCTCTCTGG GAGTAGTCAG 
GTTTTGTTGA ACTCAGGACA GCCTTTGTAT GGCACAGGGG CGCCACCTTC TTATTTGCCA 
TTAATGCGAT TGACATCTGT AAACGCAGAT ATGGCAGGAA ATATTTGGGC TGCGAATAAC 
TGGAAACCAT CTGGTTTAAA TGACTTGCTG CTAAACCCCG GTGGTGATGG CATGGTGATT 
TTTGTGGGAA TTGCAGCGCC AACTAAAGCG CCAAGCTTGG GCCCTGCACA AACACCTTAA
 
Protein sequence
MVVTQTTSDG SGNFSVKVPA NPANTSSNPI IYYAVASKSP SIVLMASLGI GPISSVHINE 
LTMVASAYAF AQLFRNDYSV GGSALSLSIA AGMAENLVSA QSGSASTIIQ TSPNGYETNT 
WSALGTLANV LAGCTQGVAN ACTNLFALTP SSNGITPTNT LQAIVNIALN SAVNVSDIYN 
LGSVVTSYTP ALTANQGPNS SAPLQKLDAW TMAVEVNNSG SSSCPFGGPA NVAFDVNGYD 
GGISKLFTVS LPSGSNPKGV AVDSLGNAWV AAGAISTVYA INTSGTIVGT YTGQGINGPW 
GVSLDAKGNV WVANFGVSLP SARYSVVQLC GATGNCPYGV SMGSAITPST GYILLSGSSQ 
VLLNSGQPLY GTGAPPSYLP LMRLTSVNAD MAGNIWAANN WKPSGLNDLL LNPGGDGMVI 
FVGIAAPTKA PSLGPAQTP