| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0305 |
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| Symbol | |
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| ID | 6184493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 274631 |
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| End bp | 275050 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671013 |
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| Product | Biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001797212 |
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| Protein GI | 171463099 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.199404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAT CTTCATTACG TAAAAACAAA CGTCGGGCAA TGTCTGACAT CAACGTCGTT
CCTTATATTG ATGTGATGTT GGTACTGCTC GTGATCTTTA TGGTCACTGC ACCAATGGTC
AATCCTGGTG TTGTCAATCT GCCAACTGTT GGTGGCGCAA AAGTGCAATC TTTACCCCCC
GTCTTTTTAA CGATTGATGC CAATGAAAAT GTCATCGTGC GCAAAGATGG TGACCCAACA
CAAACATTGA ATAAATTTGA GCTTGGTGCT TTTGCTCGCT CACAAGCAGA AAAGTCTGCG
GAGCAACCGA TTGTGATTGC AGCCGATAAA TCCATTAAAT ACGAAACAGT AATGGAAGTC
ATGTCCAAGC TCAAAGAGAA TGGTGTGAAA CGGGTTGGAC TTGCGGTCAA GACCCAATAA
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| Protein sequence | MTRSSLRKNK RRAMSDINVV PYIDVMLVLL VIFMVTAPMV NPGVVNLPTV GGAKVQSLPP
VFLTIDANEN VIVRKDGDPT QTLNKFELGA FARSQAEKSA EQPIVIAADK SIKYETVMEV
MSKLKENGVK RVGLAVKTQ
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