Gene Pnec_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0268 
Symbol 
ID6183977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp246353 
End bp247675 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content44% 
IMG OID641670978 
Producthypothetical protein 
Protein accessionYP_001797177 
Protein GI171463064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAG AAAAACGCTG GCTCATTCTG TCGCATGGTT TCAACATGGA TGGCCGTGCA 
GCGAGTCAAA CCATCACCGA CAAAATTCCG TATCTACTTG ATGCCGGAAT TAAGCCCATT 
GTGTTTAGTG CTATTACTGG TATTAAAGAT CAGCGTTTTC CTCATCGTCA ATTTTTAGCC 
TGGGGCCCAG CGGCATTTCG GTTTGACTTT AGACACTGGA TTGCAAATCA ATATGGTCGC 
GGACTTCTAT ATAAAGTATT GACCAGAACT GTATCGATTT TGTTGGCACC ATTGATTGCC 
TTGGAAAAAT TATTTCTGGG TTACTCCAGC CAATGGTCAT GGGCGATACC TGCGTTTATT 
CATGGGCGCA AATTAATACA ATCTGGACAG GTCGATCTGG TTTACAGTAC CGGCGGTGCT 
TGGTCTGCCC ATCTTGCTAG CCTATGGCTT AAGAAGGCTA CCAGTATCAA ATGGATTGCT 
GAGATTCATG ATCCGATGGT GATTCGTAAA AGTCCTGAAG ATATTGGTAT TGAAAAGCCT 
AAAAATCGAG ATGCGCAGTT TCGGCAATAT CTTGAGAAAC AGATTATTCG TTTTTCAGAC 
TTTGCATGGT GGTTTACTGA AGGTGCTGTT CACTACGCCA AAGTGCGCAA TACCAATTTA 
AATACCCCAG GCAATGCACA TGGCTTCATG GTCTTGCCTG GTGCAAATCC ACCAGGTGGG 
CTTTCTAATG AAGTGACGCA TCAATATTCT GAGAGGTTAA ATCTTTGTCA TTTTGGATCG 
CTGGCAAAAG ATCGTTCGCT TTCGACAATC TTGAACGCAG TTCAGGCGCT GCTAAAAAAA 
TATCCTCAGG CGCGTCAGCA GATTCGTGTA CACGCTTACG GCGCTCCATT AGATGTGCTT 
ACTGTTGAAT CAATTAAACA TTTTGGTTTT GATGATCTGC TGCTGGCTTA TGGTCGGCTG 
GAAAAAGACC TGGTAACGGG TAAATCAGGA CGTGAGCGTG TAATTGAAAA GATGCAGGAA 
GCCGATGTAT TGATTCTGCT GCATGGCAAT GATGAGTGGT GCGCTGAATA CATCCCATCC 
AAGTTTTATG AATACCTTTG GGCCGATCGC CCCATTTGGG GTATTACCCA CCGCAATACC 
CAGTTAGATG GGATGTTGTT AGAGCGTGGA GCCTATTTAA GTCATGAGGG TGATTTAGAG 
GGTATTAATA TGGCTTTAGA GCGTATATGG CTAGATTGGG AGCAAAAGCG CTTATCAACC 
CCAACCGGAA AACCCATAGG CGTAAAGCAA GCGGTAGATA TAATCCTAAG TGTTGTGAGC 
TAA
 
Protein sequence
MTTEKRWLIL SHGFNMDGRA ASQTITDKIP YLLDAGIKPI VFSAITGIKD QRFPHRQFLA 
WGPAAFRFDF RHWIANQYGR GLLYKVLTRT VSILLAPLIA LEKLFLGYSS QWSWAIPAFI 
HGRKLIQSGQ VDLVYSTGGA WSAHLASLWL KKATSIKWIA EIHDPMVIRK SPEDIGIEKP 
KNRDAQFRQY LEKQIIRFSD FAWWFTEGAV HYAKVRNTNL NTPGNAHGFM VLPGANPPGG 
LSNEVTHQYS ERLNLCHFGS LAKDRSLSTI LNAVQALLKK YPQARQQIRV HAYGAPLDVL 
TVESIKHFGF DDLLLAYGRL EKDLVTGKSG RERVIEKMQE ADVLILLHGN DEWCAEYIPS 
KFYEYLWADR PIWGITHRNT QLDGMLLERG AYLSHEGDLE GINMALERIW LDWEQKRLST 
PTGKPIGVKQ AVDIILSVVS