Gene Pnec_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0247 
Symbol 
ID6184446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp225419 
End bp225967 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID641670957 
Producthypothetical protein 
Protein accessionYP_001797156 
Protein GI171463043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT GGAAACCGAA TCATCCGCTG CCAATATTTA TGCTGAAGGC GGTTTATCTC 
GTTTACAAAC CTATGCAGCA AATCAAGTTT CGGGGAAAAA AAGTGACAGC TTCTTGGCGT 
GCCGCTTTGG CCGTTCGCGA TGCCGGACCG CCGGCAATGT TGCGCAGTGT GCGCCCTAAT 
ATCGTGCAAT CAATTCGTGC TTTCCGTACT CCTGACTTAC AGGAAGCGGC AACAGAATTG 
GGTCAACACT TCATTTATGC CAATTGCGCT AATGCAATAA CTAAGGGCGA GGTTTTGGAA 
TCCATAGCGA TTGCGTATTC TTTTACTAAG CAGCAGGCAA AAAACTACGA TCCTTTGTTG 
GATGCTTTAA CTACTACGGT TGATAAGTCT GGTCCACAGC CTGGGTTTGT TGTGGTACTT 
GAAGGTTTAC CATGCACACA GAAATTTGAC AAAGAGGCTC GTGAAACATT GTTAGATGTT 
TTCCGTGACG CTGTTGATTT CTGGGCTGAG CGCCGCACTC CATATCGCGT CTTCTATTCT 
TTTGCTTAA
 
Protein sequence
MIDWKPNHPL PIFMLKAVYL VYKPMQQIKF RGKKVTASWR AALAVRDAGP PAMLRSVRPN 
IVQSIRAFRT PDLQEAATEL GQHFIYANCA NAITKGEVLE SIAIAYSFTK QQAKNYDPLL 
DALTTTVDKS GPQPGFVVVL EGLPCTQKFD KEARETLLDV FRDAVDFWAE RRTPYRVFYS 
FA