| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0236 |
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| Symbol | |
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| ID | 6184209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 214504 |
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| End bp | 216546 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641670948 |
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| Product | ribonuclease II |
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| Protein accession | YP_001797147 |
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| Protein GI | 171463034 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTT TATACGAAGA AGGTGGCGAT ATCAAGATCG CCACAGTCCA GTCTGCCTCT
GGTACCGGTG ATGCAGAGTC TTGGCAGGCG ACTAGCCTTT CTGGAAAAAA GATCAAACTC
AAGGCCAAAG AGGTTTGGTT GCGTTTTGAA AAGCCAGAAG CTCAGGCGGC TATGGATGAG
GCTAGCACCC TGACTGCCGA TATTGATTTG CAATTGCTTT GGGACTGCGC TCCAGACGAA
GAATTTGGTT TGGTAGAGGT AGCTCACGAA TACTTTGGCT CGCAAGTAAG TGTTGTTCAA
CAGGTTGCGT TAGCGATTGC CTTACAAGGC GCGCCAGTAA TTTTCCGCCG CAAAGGGCGT
GGTCGTTTTC AAAGGGCTTC GCTTGAGCAA TTGCAGGCGG GCCTCGCTGC ATTGGAACGT
AAGCAAAAAG AGCTTGAGCA GCAAGCGGTA TGGCAGCAAG AGTTAGTTGC TGGCACCTTT
CCGGAAAGAC TCAAGTCTTC AGCCAAACAA TTACTTTTTT CTCCTGATAA AAATACTTTA
GCCTACAAAG CTTTAATCGC AGCCTGTACT GAAACGGGAG AGTCTCCAGC GCAGTTGATG
ATTCGTTGTG GTGCAATTGA TTCACCCTTG GCTTATCACC AGGGTATGTT TCTCAAGGCG
CATTTTCCAA ATGGAGCAGC TCATAACTCG AGTGTTGGCA TCGATCAGGA GGCTTATGCT
GCAGCCATTG CTGAGCTCCT ACTTGCCCAG GTGCAAGCCT TCTCAATTGA TGATTCAGGA
ACTACGGAGA TTGATGATGC TTTGTCAGTC ACAACCTTGC CGGAGGGTGG GCATCGGGTA
GGCATTCATA TTGCTGCACC AGGGCTGGCA ATTGTTAAAG ATGACCAATT GGATCAAGTC
GCCCGGAATC GTATGTCTAC GGTGTACTTC CCGGGTGACA AAATTACGAT GCTTCCCGAA
TCAGTCATAG AGCAATTCTC ATTAGACGAG GGCATGCCAA GACCAGCCTT ATCGATCTAT
GCTGATATTG ATGCTCAAGG AGTGGTGAAT CGAGAGACCT TGCAGATGCG CGCAGAAATG
GTGCCGATGG CGGCCAATTT ACGCTTGGAG GATATAGAGC ATCTTGTGAC TGATGAGAGC
TTGTCTGATG AAAGTGCAAG TTATCCCTAT CGTAAAGAAT TGACTATCTT GTGGCAGGCC
GCCAAACATC TGCATGCTGG TCGCCAAGAA AAGCGCGTGG CAAATGGTCT GCGGGCTGAG
CAACTAGGAT TAATTGATCT CAATGCTCTT GCAAGGGATT TTCATTTTCA AATACAAGAA
GTTGATGGCG TGCAACGAGT TGATATCGTG CCGCGTCAAC GTGGGTCTAT TTTGGACACC
ATCGTTGCAG AATGGATGAT TTTCTGTAAC AGCGCTTCCG GCCAGCTCCT GGCGGATCAT
GGTCTGCCGG GATTATTCAG AACCCAGAAG GGCTGGGGCC CGTTGCGCAC ACGCATGCAA
ACCACCCCAG GACCGCATGA AGGTTTAGGC TTGGATTATT ACGCTTGGTG CACCTCTCCC
TTGCGTCGAT ATTCTGACTT GGTTAATCAA TGGCAATTAA TCGCGCTTGC GAAGCATGGC
GTCACCGCCA AAATGGTTGC GCCATTTCCG CCACGCGATG CAACACTCAT GGGAATTGCG
GCTGACTTTG AGTCTTGTTA TCAAGCTTAT GAAGAGTTTC AAGATCGGTT GGAAAAATAT
TGGTGTCTAC GTTGGATTAT GCAAGATGGT GAATCTAAAA CGGTTCACGT ACGCCATCTA
AAAGAGGGCA TGTCCAGAGT GGAATTGGTG CCTCTGCATT TGTCGGTTCC AGAGCTTGCA
AGTCATCCAC GCATGACACG TGCAGAAGTG GTAATTGCCG ATGTAGATTT ATTGCAACTC
AGTGCGGGCG TTAGGGTGCT GGAGATCGAG GCGAAGCTTG AAACTCCTGA AAAGGAGTCG
GCTGAGCAGG ACGTAATGTC AGAGCCATCA GGTAATTCCG AAGAAGATGC TAGTCCCAAT
TAA
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| Protein sequence | MNLLYEEGGD IKIATVQSAS GTGDAESWQA TSLSGKKIKL KAKEVWLRFE KPEAQAAMDE
ASTLTADIDL QLLWDCAPDE EFGLVEVAHE YFGSQVSVVQ QVALAIALQG APVIFRRKGR
GRFQRASLEQ LQAGLAALER KQKELEQQAV WQQELVAGTF PERLKSSAKQ LLFSPDKNTL
AYKALIAACT ETGESPAQLM IRCGAIDSPL AYHQGMFLKA HFPNGAAHNS SVGIDQEAYA
AAIAELLLAQ VQAFSIDDSG TTEIDDALSV TTLPEGGHRV GIHIAAPGLA IVKDDQLDQV
ARNRMSTVYF PGDKITMLPE SVIEQFSLDE GMPRPALSIY ADIDAQGVVN RETLQMRAEM
VPMAANLRLE DIEHLVTDES LSDESASYPY RKELTILWQA AKHLHAGRQE KRVANGLRAE
QLGLIDLNAL ARDFHFQIQE VDGVQRVDIV PRQRGSILDT IVAEWMIFCN SASGQLLADH
GLPGLFRTQK GWGPLRTRMQ TTPGPHEGLG LDYYAWCTSP LRRYSDLVNQ WQLIALAKHG
VTAKMVAPFP PRDATLMGIA ADFESCYQAY EEFQDRLEKY WCLRWIMQDG ESKTVHVRHL
KEGMSRVELV PLHLSVPELA SHPRMTRAEV VIADVDLLQL SAGVRVLEIE AKLETPEKES
AEQDVMSEPS GNSEEDASPN
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