| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0201 |
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| Symbol | |
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| ID | 6183819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 182224 |
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| End bp | 183066 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670918 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001797117 |
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| Protein GI | 171463004 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.201186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTG TTAATCTCAT TAGAGTGAGT GAGCGCACCG GAGACTTTTA TCTTGCGCTT
AAAACAATTT GCCAACAACT AGAAGCTCAA ATTGAATTGC GTCGCAAGAT TCATCAAGCG
ATGAGTTATC CCCTCATTAC CCTGGCAAGC TCCTGTCTGT TGGTAATTGT CATGATGATT
TGGGTTGTGC CAGTCTTTAA GGATGTCTTT GCTCACTTTC AAGCAGATCT ACCAACACCA
ACGAAAGCAT TGATTAACAT ATCCGAATGG TTTACAAGTT TTTATATTGA GATGGCCATA
GGCCTAGTTG GCCTTGTGGG CAGCTTTAGC CTAGCATGGG TCAAGCTGCA GCGTCTGCAG
AAGTACTGCG ATCAAACCAG CTTCTGCATA CCCTTAATTG GACAATTGCT GAGATTGGCG
ACACTCACTT ATTGGTGTCG CACCTTGGGC CACCTCCTCA AATCTAGCTT ACCCCTACCC
GATGCGCTCA GAGTTACTGC TCAATCATCT AACCACTGGT TAAGCCATGA TTTCAGCGCA
GAGATATTCA TCAAACATTT AACCCGAGGC TGGTCGCTTG GAGACGCCAT CATCAAGGCT
GACCCAAGGC ATTCGCTATT TGATCTTGAG ACACTACAGC TCCTCAGAAT TGCCTCTGAA
AGCGGCGCGC TCGCGGATAT GCTGCAAAGG CGAGCCACAA TCTTAAGTTC TCAGCTAAGC
AATCGCCTAA ACACCCTAAG TCACAGTTTG GAACCATTGC TCATTATTGT TGTTGGACTA
ATTATTGGAA GTCTAGTCAT AATCTTGTAT CTCCCCATCT TTAACCTAGG GCAAATTGTT
TAA
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| Protein sequence | MEFVNLIRVS ERTGDFYLAL KTICQQLEAQ IELRRKIHQA MSYPLITLAS SCLLVIVMMI
WVVPVFKDVF AHFQADLPTP TKALINISEW FTSFYIEMAI GLVGLVGSFS LAWVKLQRLQ
KYCDQTSFCI PLIGQLLRLA TLTYWCRTLG HLLKSSLPLP DALRVTAQSS NHWLSHDFSA
EIFIKHLTRG WSLGDAIIKA DPRHSLFDLE TLQLLRIASE SGALADMLQR RATILSSQLS
NRLNTLSHSL EPLLIIVVGL IIGSLVIILY LPIFNLGQIV
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