Gene Pnec_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0189 
Symbol 
ID6184340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp170616 
End bp171104 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content47% 
IMG OID641670909 
Producthypothetical protein 
Protein accessionYP_001797108 
Protein GI171462995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0156086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTG ACCCCAAACT ATCGCGCAAG CGCACAGCTC ACGACTGGAT GGATTACCTA 
CGAGAATCGG ATGGTCTTGG GGGGATCTTG GCCAAAACAG AAAATCTAGC CAAACTCAAG 
GCGAATATCA ACGCTGCACT AGCAAATCTG GATTTAGGGC ACCTAGCCCC CAAAATTGAA 
GCTGGATGGC GTTCTGGAGC GCAAGATGAG CTTTTTTTGC TAGTTGGCAG TGCCAGCATT 
GCTAGTCGTC TACAGCAAAT TTTACCTAGT CTAATCAATG AGTTAGCTAA AAATGGCTTA 
ATTTGTAGAA CCATTACAGT GCGCGTAAAA CCCGCTCCAC CAGCCTGGGA AGTAAAACCA 
CGCCTAGATC AGCGTGAGAG GCCCAAAGGA CTGAACGAGG TCGCAAAAAA ATCCTGGGAA 
TCACTTTTGG AGAAATTAGG CCCCGACTCA GGATTGCGCT CCTCTATCGA GAAGCTGCTA 
AAAAAATAA
 
Protein sequence
MNFDPKLSRK RTAHDWMDYL RESDGLGGIL AKTENLAKLK ANINAALANL DLGHLAPKIE 
AGWRSGAQDE LFLLVGSASI ASRLQQILPS LINELAKNGL ICRTITVRVK PAPPAWEVKP 
RLDQRERPKG LNEVAKKSWE SLLEKLGPDS GLRSSIEKLL KK