| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1818 |
|---|
| Symbol | |
|---|
| ID | 6164649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1596003 |
|---|
| End bp | 1597160 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641668981 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_001795181 |
|---|
| Protein GI | 171186262 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
|---|
| TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0364142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA ACAGGCCGCC TAACGGCGTC TACTACATCA AGACGCCCGT GGAGATGAGG
GCGTTTATCA ACCTGCTGAA GAAGTTCAGG GGCTACGCAA CTACCTTGAT CACCCTCTAC
ATAAACTCGG AGAGGCCTAT CCCCGACGTG TTGAACCTGC TGAGGTCTGA GTGGTCCACC
GCCTCCAACA TCAAGGACAA GACCACCAGG ACCCACGTCC AGGACACACT GGAGCGTATA
ATAAACAACC TTAAGGGCGA GGCGAAGGCT CCCGAGAACG GGATGGCCGT CTTCGCCGGG
TTCCACATGA TAAACCAGGG CAACTACGAG TGGGTTTACT ACGTCGTTGT GCCTCCCCAG
CCCATATACA CCTTCAAGTA CATATGCGAC ACCGCCTTCC ACACCGAGAT ACTGGAGGAT
CAGATGCACG CCGGCGTTGT ATACGGCATC GTCGTCGTCG AGAGGGGGGA GGCCGTCATC
GCGCTACTGA AGGGGGGACA GTGGGAGGTG GTGAAGACCG TGGAGTTCTT CGTGCCGAGT
AAACACCACG CCGGCGGCCA GTCGGCGAAC CGCTTCAAGC GGCAGACTGA GCATCTGGCG
GAGACCTTCT ACAAGGTGCT GGCGGAGGAG GTAAACAAGA TCTTCCTCCA GATACCGACG
CTGAAGGGCA TCATAGTGGG GGGTCCGGGC CCCACCAAGG AGGACTTCCT AGAGGAGGGG
GGTCTCGACT ACAGGCTTAA GGATAAGGTC TTGGCGGTGG TGCCGGCCTG TTGCGCCAAC
GAATACGGGG TTGTGGAGGC GATAAAAAAC GCCCAGGAGC AGCTCAAGGA GAGCGAGTAC
GTCCACGCCA AGGAGGTCAT GGAGAAGGTG ATGTACTACG CGGTGAGGAA GAGCGACTAC
ATGGTATACG GAAAGGAGAG GGCGCTCAAG GCCCTGGAGA TGGGGATGGC CGAGACCATA
GTCGTGGCCG AGGAGCTCGG CGAAGACGCC GTACTTGAGG TGGTGATGAA GGCCGAGGAG
AAGGGGGTCA AGGTGGAGGT CGTCCCAAAG GGCGTCGAGG AGTCTAAAAC GCTGATGCAG
GCCTTCGGCG GATACGTCGC GCTCCTCTCC ACCCCAGTGT GGGTGCTGGA GCAACAGATC
CAGGCAGAGG CCGCTTAA
|
|---|
| Protein sequence | MSFNRPPNGV YYIKTPVEMR AFINLLKKFR GYATTLITLY INSERPIPDV LNLLRSEWST
ASNIKDKTTR THVQDTLERI INNLKGEAKA PENGMAVFAG FHMINQGNYE WVYYVVVPPQ
PIYTFKYICD TAFHTEILED QMHAGVVYGI VVVERGEAVI ALLKGGQWEV VKTVEFFVPS
KHHAGGQSAN RFKRQTEHLA ETFYKVLAEE VNKIFLQIPT LKGIIVGGPG PTKEDFLEEG
GLDYRLKDKV LAVVPACCAN EYGVVEAIKN AQEQLKESEY VHAKEVMEKV MYYAVRKSDY
MVYGKERALK ALEMGMAETI VVAEELGEDA VLEVVMKAEE KGVKVEVVPK GVEESKTLMQ
AFGGYVALLS TPVWVLEQQI QAEAA
|
|---|
| |