Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1807 |
Symbol | |
ID | 6164682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1586639 |
End bp | 1587340 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641668971 |
Product | ABC transporter related |
Protein accession | YP_001795171 |
Protein GI | 171186252 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.820748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA CCGAGGGTCT CGACGCTGGG TACGGAAAGC TACAGGTTCT ATTTGGGGTA GACTTCGTCG CTCAGCCCGG CAAGATAACA GCCGTCTTAG GGCCCAACGG CTCCGGGAAG TCAACGCTCT TAAAGGCCAT TTTCGGCATC GCGAAGATAT ATGGCGGCCG CGTCTACGTG GGAGACCGCG ACGTGACTAA GTTGCCCACA CACGAGCGGG CCCAGCTCGG CGTCGCCTAC GTGTCGCAAC TTAGAAACGT CTTCTCTACG CTGTCGGTTC TGGAAAATTT GAGACTCGCA GGCTACGGGC TGTCAAAGGA CGAGTTCGAG GAGAGGCTTA GGGAGGTGGC CGAGGTGGTG CCCCTGAGGG ACATCCTTGG GAGACGCGCC GGCGAGCTGA GCGGGGGCTG GAGGCAGTTG GTGGCGATCG CCATGGCGCT TATGAGACGG GCCAACATCT TCATGTTGGA CGAGCCGACG GCCCAGCTGG CTCCGAAGAT GGCAAACCAA GTGCTTGAGG TGGTGGCGAA GCTCAGGGAG GCGGGCCACA CGGTGGTGTT GGTGGAGCAG AACGCCAGAC TCGCCCTAGA GGTTGCGGAC GACGCCTATC TCTTGGTGAG CGGGAGAGTA CACTGGAGCG GGCCCGCCAG AAAACTGTTG GAGGAGCGGG AGCTCGGGCG GCTCTACCTA GGCCTCAGGT AG
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Protein sequence | MIKTEGLDAG YGKLQVLFGV DFVAQPGKIT AVLGPNGSGK STLLKAIFGI AKIYGGRVYV GDRDVTKLPT HERAQLGVAY VSQLRNVFST LSVLENLRLA GYGLSKDEFE ERLREVAEVV PLRDILGRRA GELSGGWRQL VAIAMALMRR ANIFMLDEPT AQLAPKMANQ VLEVVAKLRE AGHTVVLVEQ NARLALEVAD DAYLLVSGRV HWSGPARKLL EERELGRLYL GLR
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