| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1723 |
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| Symbol | |
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| ID | 6165416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1515800 |
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| End bp | 1516663 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641668886 |
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| Product | ribonuclease Z |
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| Protein accession | YP_001795087 |
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| Protein GI | 171186168 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00214675 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000691229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTCTTT TGAAGCTGGT GTTCCTCGGC ACAGGCGGGG CCGTGCCTAG GTCGGACAGG
ACGCTCCCAG CCATATACCT CGAGGACTGG CTCGGCCACA GGTTCCTCCT AGACGCGGGG
GAGGGGGCGC AGTATAGGCT ACTGCAGATC GGCGTGTCGC CGGCCTCCCT AACCGCCGTG
GCCATCACCC ACCAGCACGA GGACCATACC CTCGGCCTGC CGGGACTCGT CATAACCAGC
AGGTTCCTCG GGGGGCGAAC CGCCGTGTTG GCCCCCCGGT CGATGCACAA GGCGCTGGAG
GCGCTGGGGG TAGAGGTGAT GGACAGCTAC GGCGGGGACC GCCTCAGGGT CAGCTGCGTC
GAGGTGTGCC ACACCGTGGA CGCCTGCGGA TGGCTCTTCC AGTGGGACGT GGGCTACAAG
CTGGATCTCT CCAAGGCGGC CGGCCTCCCC CGGTGGGCGC TCACCAGCTT GATAAGGGGG
AGCCCCGTGG AGGTGGGGGG CCGGCTGATC AAGCCGGAGG ACGTGGCGGA GCCTGGACAC
AAGCGGCTAC GCCGCCTGCT CTACACGGGG GACACGGCGC CTTGCCCAGA GATGTGGAGG
AAGGTGGGCG AGGTGGACGT GTTGATACAC GAGGCGACCT TCGCAGACGA CGTGGAGCCC
CAGAAGGCCC ACGAGGAGGG CCACTCCACG GTCGCCGACG CGGTGGAGGC CGCGAAGGCC
CTCAACGCCG GCGTGCTCAT CCTCACCCAC GTCAGCTCTA GGTACCCAGA CAAGAGGAGG
CACAGGGAGC TCGCGGCCTC CGTGAAGCCC CCGCCCCACG TCTACGTGCC GGAGGACTTC
GACACCGTCC TCGTCAGACT TTAG
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| Protein sequence | MPLLKLVFLG TGGAVPRSDR TLPAIYLEDW LGHRFLLDAG EGAQYRLLQI GVSPASLTAV
AITHQHEDHT LGLPGLVITS RFLGGRTAVL APRSMHKALE ALGVEVMDSY GGDRLRVSCV
EVCHTVDACG WLFQWDVGYK LDLSKAAGLP RWALTSLIRG SPVEVGGRLI KPEDVAEPGH
KRLRRLLYTG DTAPCPEMWR KVGEVDVLIH EATFADDVEP QKAHEEGHST VADAVEAAKA
LNAGVLILTH VSSRYPDKRR HRELAASVKP PPHVYVPEDF DTVLVRL
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