Gene Tneu_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1720 
Symbol 
ID6165507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1512434 
End bp1513435 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content58% 
IMG OID641668883 
Productputative RNA methylase 
Protein accessionYP_001795084 
Protein GI171186165 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0118315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000010347 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCACTACC TAATAACCAC CGTCCCAGGC CTCGAGGACA TAGCCGCCGA GGAGCTGGCC 
GAGAGGCTAC ACGCCAGGCG GGCAAAAGCC ATATACATGA CCGGCAGAGT CGCCGCCGAG
ATAGACGCGC CCCCCGCCCA CCTCTACAAG CTGAAAACCG CCGAGAGATT CGGCATCCTC
CTAGGGGAAG GCACGGCCCA AACCCTCCAA GACGTAGTCG CCCTGGCGGC AACACACCTC
CCAAAGGCGG AGAGGTACCT CACCAGAAAC ACCACAGCCG GCATCCGCTG CGAAAGAGTA
GGCCAGCACC CCTTCACCTC ACGCGACGTG GAGAGAGAGG TGGGGAGGTG GCTAAAGGAG
AGGGGGTACG TCATAAGCCT AGTCGACCCA GACGTCGAGA TAAACGTCGA CGTAGTACAC
AACTACGTCA CGGTGTGGAT CACCGTGGCC AAAAAAAGCC TCAAAGACAG GCCCTGGCGC
GCCTATGAGC ACTACGCCAG CCTAAACCCC ATAATCGCCC ACGCCATGGC CAGACTCGCC
AAGCCGGCCC CCGGGGAGAC CATATGCGAT CTGACATGCG GCGGCGGAAC CATAGCCGCA
GAGGCGGCCG AATACGCCCC CTGGGCCAGA TACATATGCG TAGACATATC CCTAAAACAC
ATAAAAGGCG CCGCCTTAAA CACGGCCCGC TACCCCCAGG TGGACCTCCT CTGGTTCGAC
TCCACCAAAC TACATAGAGC GGTACGCCCC ATATGCGACA AATACATATT CAACCCCCCA
TACGGCTTCA GAATACCCGG CAAGATAGGA AGGCTATACC GCCTCCTCGG AAAAGCCATG
CGCAAGCTCA CCCGCCACTG CGCCACCTAC GTCACAATAA CCCCCAGACA CAAAACCTTC
ACAAGCCAAG TAGGAGGCGA GATAATCATG AGAAGAGTCA TATACCAAGG AGGCCTATAC
AGCAGCATCA TAGTGGGGAG AATATGCCCC ACCTCCCCCT AA
 
Protein sequence
MHYLITTVPG LEDIAAEELA ERLHARRAKA IYMTGRVAAE IDAPPAHLYK LKTAERFGIL 
LGEGTAQTLQ DVVALAATHL PKAERYLTRN TTAGIRCERV GQHPFTSRDV EREVGRWLKE
RGYVISLVDP DVEINVDVVH NYVTVWITVA KKSLKDRPWR AYEHYASLNP IIAHAMARLA
KPAPGETICD LTCGGGTIAA EAAEYAPWAR YICVDISLKH IKGAALNTAR YPQVDLLWFD
STKLHRAVRP ICDKYIFNPP YGFRIPGKIG RLYRLLGKAM RKLTRHCATY VTITPRHKTF
TSQVGGEIIM RRVIYQGGLY SSIIVGRICP TSP