| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1593 |
|---|
| Symbol | |
|---|
| ID | 6166106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1408205 |
|---|
| End bp | 1409035 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641668754 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001794962 |
|---|
| Protein GI | 171186043 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG TCTACCTGGG CCCAGCCGGC ATTCCTCAAT ACGTCGTAAA GGCGAAGTCC
ACGCTAGACG CGGTAAAAGC AGTGAGGGAG CTGGGCCTCA ACGCCATGGA GGTGGAGTTC
GTACAGGGGG TGAGGATGTC GAGGGAGTTG GCGAAGCAGG TGGGGAAGGC GGCTCAGGAC
TACGACGTCA AGCTCTCCGT GCACGCCCCC TACTTCATCA ACCTGTGTTC CGAAGAGGCG
GATAAGGTGG AGAAATCTCG GCAGAGGCTG GTGGATTCGC TAGACAGAGC ATATCACATG
GGCGCTTGGG TTGTGGTCGT CCACGCCGCG TACTACGGGA AGTTGGGTCC CCAGAGGTGC
TTCGAGAAAG TCAAGGAGGA GTTGGAGAAG GCGTATAGGG AGTCCGGGAT CGGATCCGGC
GTGTATATAG GCGTGGAGAT CACAGCCAGG ACAAACCAGT TCGGAAGCGT AGAGGAGGCG
TTTAAGCTCG CAAAGGAGCT ACATTACGTA ACGCCGGTGG TGGACTGGGG CCACCTCTAC
GCCAGAAACA ACGGAGTTAT AAACTACGGA GAAGTCCTAG ACCTCTGGGC GAGGGAGTTC
GGAGATAGAC ATATGCACAC ACACTTCACC TCCGTCCGCT ACCGAAACGG GAAGTACGTG
GACGAACACG AGCCCATAGA GCGAAACATG CCGCCGTTTG AGCCGCTGGC TGAGGAGCTC
AAGAGGAGGG ATCTCGCGAT AACCCTAATC TGCGAATCGC CGCTTTTGGA AAAAGATGCG
CTCCTGATGA AGGAGATCCT CGAAAAACAC GGCGTTAGCC TTGCCACATA A
|
|---|
| Protein sequence | MAKVYLGPAG IPQYVVKAKS TLDAVKAVRE LGLNAMEVEF VQGVRMSREL AKQVGKAAQD
YDVKLSVHAP YFINLCSEEA DKVEKSRQRL VDSLDRAYHM GAWVVVVHAA YYGKLGPQRC
FEKVKEELEK AYRESGIGSG VYIGVEITAR TNQFGSVEEA FKLAKELHYV TPVVDWGHLY
ARNNGVINYG EVLDLWAREF GDRHMHTHFT SVRYRNGKYV DEHEPIERNM PPFEPLAEEL
KRRDLAITLI CESPLLEKDA LLMKEILEKH GVSLAT
|
|---|
| |