Gene Tneu_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1582 
Symbol 
ID6165993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1397525 
End bp1398493 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content54% 
IMG OID641668740 
Productinner-membrane translocator 
Protein accessionYP_001794952 
Protein GI171186033 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTTT TCGGCGTGGA TTACAATACC TTGGCGAGCG CGATTATTTT CTCAAATATC 
TATGTATTGT TGAGCCTGGG CCTTAATTTA ACATATATCA CCACGAAGAT ACCCTCTTTT
GCCCACGGCG ATTTGGCGAC GGTCGGCGCA TATATAAGCT ACTTCGCTAT TTACTTTCTG
CTCATGCCAT ACCTCTCGCA GTTGGGTATC CCAGTAAATG TGTATCTGAC TTTCCCGCTG
GTTGCCTTGG CGGGAGGTGC CGTGGCGGTA TTAAGCTATC TCCTGGTGTT TAGGCCTATG
ATCAAGAGGG GTGCCGGCAT CACGCCGCTT ATGATCGCGT CTTTTGGACT TCACTTCGTC
ATATTTGCCT CGGTGGCCCT CGCGGCGGAC TATGTCCAGA GCAGATACGG CGTTCTCACG
AGAAACGTTC TACTCTCTAG GTGGGAGCTC ATCTGGCCGG GCACCGACTT CCTCACGTCG
TCCCTAATTA ACACGACTTT GTCTGTTGTC GTCACTACGG CGTTGCTGTA TGTCCTGCTG
TATAGAACCA GATACGGCGT TATCATGCGG GCTAGCATTG ATAACCTGTA TCTGGCTAGG
GCGGTGGGTA TAAACGTTGA GAGGGTGTTC GCCGTTGCTT GGCTTCTCAT CGGCGCCGTC
ACCGGCATCG CAGGCGTCTA CATGGCGATG TACTACCCAA TGTCGGAGGA GTTGGGGTGG
CTGAGGCTTG CGCTTGTGTT TGTGGCCTCG GTGGTGGGGG GCCTGTCAAA CATCTACGGC
GCTGTGTTGG GCGGCTATGT GGTCGGGCTA AGCATGGTGC TTGGAGCCGC CTACATACTG
ACACCGCTTA ACATTCCGAC CGAGTTCCAG CTGGCTATAC CTTTCGCGTT TGTGATAGCT
ATTCTGCTGT TTGCGCCGCA GGGTCTCGTG GGAGTGATAT CCCAGGCGTT GCAGAGGGCA
AGGGGATGA
 
Protein sequence
MGLFGVDYNT LASAIIFSNI YVLLSLGLNL TYITTKIPSF AHGDLATVGA YISYFAIYFL 
LMPYLSQLGI PVNVYLTFPL VALAGGAVAV LSYLLVFRPM IKRGAGITPL MIASFGLHFV
IFASVALAAD YVQSRYGVLT RNVLLSRWEL IWPGTDFLTS SLINTTLSVV VTTALLYVLL
YRTRYGVIMR ASIDNLYLAR AVGINVERVF AVAWLLIGAV TGIAGVYMAM YYPMSEELGW
LRLALVFVAS VVGGLSNIYG AVLGGYVVGL SMVLGAAYIL TPLNIPTEFQ LAIPFAFVIA
ILLFAPQGLV GVISQALQRA RG