Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1444 |
Symbol | |
ID | 6165055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1280729 |
End bp | 1283116 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641668602 |
Product | SMC domain-containing protein |
Protein accession | YP_001794815 |
Protein GI | 171185896 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.353031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAGGA TAGAGAGGAT TGAGTTGGAG AACTTCAGAT CCTACAAAGG CAGACATGAG CTACGCATAG GCGACGCCGC GGTCTTCTGG GGCAGAATAG GCGCTGGCAA GACATCGATA CTGTACGCAA TAGAGTACGC TTTGTTTGGT AGACAGCTTG AGGTGAAGGA AAGAGTTGCG AGGCTTGTCG ATCTAATCAA CGCAGATGCG CAAGAGGCTA GGGTGGCGCT GGAGTTGCGG AAAGGCGGCG AGTTGCTGCG CGTTGAGCGA AGGCTGGGGA GGAGAGGCGG CGAGAGGGTT GTCCTGCACT ACGGCGGCGT AGAACACCGG GGGGATCAAG CCGAGGAGAA GCTGGCGGAG CTCCTGGGGG CTGACGAAGA CGTCTACGAG CGCCTAGTCT ACATATCGCA TAGGACGCTT GAGGGCTTCA TATACGGCAC AACGCAGAAG AGGGCTCTCT CGGTGGACCG TCTCTTCGGT ATAGACGTCG TAGACGGCGT GATCAAGGCC GTGTCTACAT ATGAGAAAGC CCTGCTCAAC GTTGCGGAGG ATCTCAGGAA GAGGCTTGCG TCGTATGAGA AATACAGGGA GGTCATCAAG CGGTATGGGG GCTACAGAGG CGTAGAGGCT AGGCTGGGGG CTGTTGAGCA AGAGCTTGAG GCGTTGAAGA AGAGGGAGGA GGCGCTTTCG GCCGAGGCCG CTGACCTCGC GAAGAGGAGG ACCGCCTACC TGGAGAAGAT CAGAGAAAAC GAGGGCCTTC TCCTGGAGTA CTACAGAGCG AAGTCGGAGC TTGAGGTCTT GGAGTCAGAT GCCGGCGGAG ATGTCGACGT ATCTGCGGTG GAGAAGATAA GGGAGGCGCT TCGGGAGGCA CTAGAGGAAT ACGAACATCT GTTGGGCCGC GAGCTTGCCG AGAGGCTGGA AAAGGCGGCA GATTTAGAAT CTCTATCCAC GGCCATGTCC GAGGCCTACG AGGCGCTCCT CAAGCTGGCG GGCGAGTTGG AGGCGCAGAT CTCGGAGACT AAGAAGACGT ATGAACAATT GCTGGCTAGG GCGAAGCGGC TTGACGAAGA GGTGCGGGAC GCCGAGGCTA AGCTCAAGAG GTTGGAGAAG TCGTACAACC GCTTTAAGGA GCTTCAGCGG TCTTTCCAGT CTCTAGACGC CGCAAGAGCG GCCCTCGCTG AGGTGAGGAA GCGGCTTGAC GAAGTGGAGA GATCCGTGGC GTTTCACTCG GCGTTGAGAA CAGTGGCTTT GTACACGGCG GAGACTGGGG CTGAGCGGTG TCCGCTGTGT GGCTCGCCGA TAGATCGCAG AGCCGCGCTA CGGGTTGCTG ATGAGGTAGA GGGGAAATTC GGCGAGCTTA TCCGGGAGGC GGAGGCCCTC AGGGAAAAGG TAAGAGAGCT TGAGAAGGCC GTAGATGAGA TGGACGCGTT AAGCGGCGAA GTCGCGGAGT ACCTAGCCAC GAAGGCAAAA GCGCAGGAGC TCGCGCTTGA GAGGGAGGAG GTGGTCAAGA GGGTTCTCCA GGCGGAGAAG TCTGTGAAAC AGCTGGAGAA GAAGGCAGAG AGGCTCCGGG CCCTCCTCGC GAGGATAGAT AAGCGCATTA TAGCAGAGGC CGTGGCTAAA TACGGAAGAG CGCTGAGGGC TAGGGAGCTC CGCCGTAGAG TTAAAGAGCT GGAGGAGGCG TTGGCAAAGG CGGGGGTGGG GGGCGAAACT CTCGACGTGG AAATGCGGTG GAGAGAGGTT GTGGCCGACT TAGAAAAAAC GTCGAGCCGC ATGGCGGAGC TTCACAGGGA GAAGACGAGC CTGGAGGAGG TGGTGAGGGA GGTAGGCGGC GACGCCGAAT CGCTGAAGAA GAAGCTGGAC TCCGCCCTAT ACGCCTACGG CAGACTCCAG GAGCTGAAGG CCAAGCTGGA GCTGGCTAAG GTAAACGCCA GGGCTAGGTT GCTGGAGGTG GCAAGATCGA AGTTCAACGA GGTTTTTCTC TCGCTCTACA AATACGGAGA TTTAGTCGGC GTCAACGCCG ACTTAGAACA GCGCAGGGGG TACTACGAGT TCTACGCGGT GACGCCCACG GGGGAGCGAT ACGGCATTTC AAAACTGAGC GACGGGCAGA GGCTCTCCAT CGCCCTCGCC CTAGCCCTGG CCCTCCGTGA TGTCTCGAAC ATCCACATAG GCTTTGTGAT CTTCGACGAG CCGATACCAT ACGTAGACGT CAACATAAGG AAGGCCTTCG TAGATCTGGT ACACGCTCTA TCAAACAAGT ACCAGATAAT CGTCGCGACG CAATCCAGGG AGTTCGCAGA TCTAATAAAA AACGCGCTAA ACGCCAAGCT CTACTCGGTG GCGAAGAGGG AGAGCTCCGA GGTGAGGGAA GAGAGAGATC AGAGCTAA
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Protein sequence | MWRIERIELE NFRSYKGRHE LRIGDAAVFW GRIGAGKTSI LYAIEYALFG RQLEVKERVA RLVDLINADA QEARVALELR KGGELLRVER RLGRRGGERV VLHYGGVEHR GDQAEEKLAE LLGADEDVYE RLVYISHRTL EGFIYGTTQK RALSVDRLFG IDVVDGVIKA VSTYEKALLN VAEDLRKRLA SYEKYREVIK RYGGYRGVEA RLGAVEQELE ALKKREEALS AEAADLAKRR TAYLEKIREN EGLLLEYYRA KSELEVLESD AGGDVDVSAV EKIREALREA LEEYEHLLGR ELAERLEKAA DLESLSTAMS EAYEALLKLA GELEAQISET KKTYEQLLAR AKRLDEEVRD AEAKLKRLEK SYNRFKELQR SFQSLDAARA ALAEVRKRLD EVERSVAFHS ALRTVALYTA ETGAERCPLC GSPIDRRAAL RVADEVEGKF GELIREAEAL REKVRELEKA VDEMDALSGE VAEYLATKAK AQELALEREE VVKRVLQAEK SVKQLEKKAE RLRALLARID KRIIAEAVAK YGRALRAREL RRRVKELEEA LAKAGVGGET LDVEMRWREV VADLEKTSSR MAELHREKTS LEEVVREVGG DAESLKKKLD SALYAYGRLQ ELKAKLELAK VNARARLLEV ARSKFNEVFL SLYKYGDLVG VNADLEQRRG YYEFYAVTPT GERYGISKLS DGQRLSIALA LALALRDVSN IHIGFVIFDE PIPYVDVNIR KAFVDLVHAL SNKYQIIVAT QSREFADLIK NALNAKLYSV AKRESSEVRE ERDQS
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