| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1380 |
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| Symbol | |
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| ID | 6165523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1227995 |
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| End bp | 1228816 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641668536 |
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| Product | exosome complex RNA-binding protein Rrp42 |
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| Protein accession | YP_001794752 |
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| Protein GI | 171185833 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2123] RNase PH-related exoribonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCA TCTCGCCGTA CGGCAAACGC TTTATCTCCT ACCTACGGAG GGAGCAGATC
AAGAGGCTTC TAGCGACGAG ATACAGGGTA GACGGGAGAG AGCCGGAGAG AGTCAGAAGC
GTAGAGATAC GAACAGGCGT TGTTAAAACA GCCGACGGCT CCGCCGAGGT GAAGCTCGGG
AGGACACATG TAGTGGCTGG AGTAAAGGTG GGGCTTGGGC AGCCCTTCCC CGACGCCCCC
GACGAGGGGG TGCTAGTCGT CAGCGCCGAG GTGTTGCCTC ACGCCTCGCC TTATACCGAG
GTTGGGCCTC CAGACGAGTC GGCTATAGAG CTCGCCAGAG TTGTAGACCG CGGCATCAGG
CACTGCGGCT ACGTGGACTT CAAGAAGCTA GCCGTGGAGG GGGGCAAGGC GTATATACTG
TGGGTAGACC TATACGTCAT AAACGACGAC GGCAACTTGG TAGATGCCGC TAACCTAGCC
GCTGTCGCCG CGCTGAAGAA CACGCAGCTA CCCGCCGTCG TTAAAGAGGA GCAGGGGGTT
AAACTGGACC GCAATAACAA AACGCCGTTG CCCGTGGACT TAAACAAAGC GCCCATCGCG
GTGTCTATCG GCAAAATAGG AAGCGTCCTC CTGCTCGACC CAACGTTGGA GGAGGAGCTC
AGCTTAGACG GCCGTATAAC CTTCACGATA TCTGAGGACC GTATCGTGGC GGCGCAGAAG
ACCATAGGCG CCTTCGCCCC CCAGGAGCTG GAGGCGGCGC TGGATCTTGC TTGGAAGGGG
AGGGGCCAAT ACGCCGAGTT TCTAAAGAAC GCCGGCATCT AA
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| Protein sequence | MASISPYGKR FISYLRREQI KRLLATRYRV DGREPERVRS VEIRTGVVKT ADGSAEVKLG
RTHVVAGVKV GLGQPFPDAP DEGVLVVSAE VLPHASPYTE VGPPDESAIE LARVVDRGIR
HCGYVDFKKL AVEGGKAYIL WVDLYVINDD GNLVDAANLA AVAALKNTQL PAVVKEEQGV
KLDRNNKTPL PVDLNKAPIA VSIGKIGSVL LLDPTLEEEL SLDGRITFTI SEDRIVAAQK
TIGAFAPQEL EAALDLAWKG RGQYAEFLKN AGI
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