Gene Tneu_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1279 
Symbol 
ID6165855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1143495 
End bp1144673 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content63% 
IMG OID641668433 
Producthypothetical protein 
Protein accessionYP_001794652 
Protein GI171185733 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.114158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGAGT TCTTCCAGGG TTTTACGCTT GTCTACGGCC CTCCTGGGTC TGGTAAGACG 
TCTCTCGCCT TGTATGGGGC TGCGCAGATG GGGGAGAGGG TGCTCTACGT GGGGTTCTAC
GAGACGGCGG ATAAGGTGAG GGCTAAGGCG GAGGGGCTTG GGCTGGACTT CTCCAAGTTT
GTCGTGCTTG ACTTCCTCGC CGTGTCGGAC GTAGATGTCT TGTTGTCTAG CGTGGTGGAG
CAGTACCTCA AGTATTCGCC TGACGTGGTG GTTCTGGACG GGATAAACGC CCTTCCTCAG
ACCAGGGAGG CGGCCTCCTC GATCTATAGG ATCTTCGGCG TCCCCACCAT CGCCGTTGGG
GAGGAGCAGA TCGGGGGGTC CCACTTCGCC TATGTGGCGG ATACCCTTCT CGAGGTTAGC
CAGGTCTTCC ACAGGGGGGC CCGCTACAGG AAGATCAGGG TTGTTAAGAC GCGGCTGGGG
CCTGGGCCGG GGGTGGAGTT CTACTTCACC ATCTCTAGAC GCGGCGTCCG CATCGTGAGG
AGGTGGTCGC AGAGCTTTAT GAGGCCGGAG CCGGCGGCCT CCCCCTCTGG GAGGAGGGTG
GCCTTCTCGG AGGAGGTGGT CTCGGCCCTC GCCAGGGCTA TGCCTGGGCG TAGGAGGCCC
GGCCTTCTGG CGGGTAGCAG AGTTGGGGCT TTCCTGTGTG AGGACCCCGT CTGTCTCAAG
ATCGCCGCGG GCTACCTCTG CGACTACCTC GACGGCGCGA GGGTGGGGGT CGTCTCCACC
TACGGCCACA TGGCGGCTTT GGCGGAGCAG ATGGGCTGCT CGGTGGAGGA GGTGGTGGTG
CCTACGTCTG AACTCGGCGA TGATCAAGCG CTGTGGAGCG CCGTGGAGAG GCTGGGGGAT
GTGCAGGTTG TTTCGCTCTA CGGGCTTGAG GAGGTTCTCC ACGTATATGG GGCCGAGAGG
GTGGGGTACG TCCTCGACTT CGTCCACAGC GCCTTCCCGG AGGCGGCTCT GCTCGCGACG
TTTAGGGGGG TCGAGCCCAC GCCCGACCTC TTGACCATGT TCAACACCGT CTGGCGGTAC
TTTCCAGACA GGGCGGTGGT GGTGAGGTCG GCACTGGGGT GGCCCGTCCA GGTGTTGAGG
GTGAGGGAGG AGGGGGGCCG CTTTATTCTG TCTGCATAG
 
Protein sequence
MREFFQGFTL VYGPPGSGKT SLALYGAAQM GERVLYVGFY ETADKVRAKA EGLGLDFSKF 
VVLDFLAVSD VDVLLSSVVE QYLKYSPDVV VLDGINALPQ TREAASSIYR IFGVPTIAVG
EEQIGGSHFA YVADTLLEVS QVFHRGARYR KIRVVKTRLG PGPGVEFYFT ISRRGVRIVR
RWSQSFMRPE PAASPSGRRV AFSEEVVSAL ARAMPGRRRP GLLAGSRVGA FLCEDPVCLK
IAAGYLCDYL DGARVGVVST YGHMAALAEQ MGCSVEEVVV PTSELGDDQA LWSAVERLGD
VQVVSLYGLE EVLHVYGAER VGYVLDFVHS AFPEAALLAT FRGVEPTPDL LTMFNTVWRY
FPDRAVVVRS ALGWPVQVLR VREEGGRFIL SA