| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1134 |
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| Symbol | |
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| ID | 6165757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1023368 |
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| End bp | 1025068 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641668285 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001794510 |
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| Protein GI | 171185591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0626867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000190446 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGGTA GAGGGCTTGA CACGCTGGTG AGGGAGCTGA GCCTGGCGTG GTGTAGGTCG
AAGGGGGAGC CCAGCTGCGC CGTGAGGGAG GAGGTCCTCG CGGAGCAGGC CAAGGCGGCT
GAGGGGATCG AGAGGTCAGA CGGCGTGATC CTCCTCAAGG CGCCGACGGG CTTCGGAAAG
ACCGAGATCT GGACAGCGCC GTTTTTCGCC CAGTGGCTTA GGGGGGAGTG GTTCGCGCCC
AGGTTGTACG TCGTCGAGCC CATGCACGCC CTCCTTAGGC AGATGAAGAG GAGGATGGAG
GTCTACGCCC AGGCCGTCCA AGGCCTGGGG CTCCCGAGGC TGAACGTCGC TGAGGACCAC
GGCGAGGTGG CGAAGCCCCT CTTCCTATAT GGGGGGCACA TAGTCCTCAC CACGGTCGAC
TCGCTGGCCT ACGGCTACCT CGCGAGGCGG GTGCAGAGGT GGCGGGAGGA GGGCGTGGAG
AGGGGGAGGT ACAGCATGCC CGCGGGCCTA CTCGCAAGCG CCTACATTGT CCTAGACGAG
GCCCACCTCA TACAGGACGA GGCCTACCTA GGCCCCAGGG TGCTGGGGAA GATAGTCTGC
GACCTGGCCT CCGCCGGCGC CAAGGTCGTC ATATCCACCG CCACGGTCCC CGAGACCTTC
CTCAAGCACA TCCCGTGTCT CGGCGGGAGG CTGACGCTTG GGTCCGGCAC TGTCAGAAGA
AACGTGGAGG TGGAGAGGAG GAAGGGGGTC CTCAAGGCGG AGGAAATCGA ATGCGGCAGG
CCCACCATCG TCATTGTGAA CACGATAGAG AGGGCCCGGC GCATCTACAA ACAGGTGAGG
TGCGGGAAGA AGGCCGTGGT GCACTCGTTG ATGAGGAGGG AGGACAGGGA GAGGCAGCTG
AGCAGGGTGC TGGCGGACGG AAAGGTGGCC GAGGACGCGG TGCTGATTGG GACCCAGGCG
CTTGAGGTGG GGCTCGACTT CTCCAACCTA AGGGCGCTCT ACACCGAGAC GGCCCCCGTA
GACGCGCTGA TACAGCGCAT TGGGAGGGTG GGGAGAGACG GGGGTAAGGC GGAGGCCTAC
ATCTACGAGG CCGAGGGAGA TGCCCCCTAC CCGCAGACCC TCATGCAGGC CACGCGCGAA
GCCCTTGAGG AGGAGCTACG GGGAGGCGCC GCGCTGACGT CTTGGGAAGA CGCACAGAGG
GCCGTGGACA GAGTGTACAA CGAGAAGGCC GTGGAGGAGC TCATGACGAG GGGGCTGGCG
TGGTACGGCC AAGCGCTCGG CTACCTGCAG GAGCTGTCCC TCTTCTCCTA CCCGCCCAGA
GGAGAGGTGA GGATAAGGCC CTCCAGCTAC ATCACGCTTG TTATTGCCGA CGTGAAGCAG
GATGGGGATA AGGGGCGCTA CATCACGGAG GAGGACGTGG AGAGAGGCGC GATGAAGATG
AGCTACACCT CCAGAGAGGA CCCCAGGATT AACGCCCTGC TCCAGAAGGT ATCCACCGCA
TATACGGTGA GGGGGATCGC CACGGCGAAG GACGAGACTC TCTACTACCT AAGCGAGCTC
CGGGGGGGCT GGGATGGGGT TGAGGTGGTT GTGGTGGACA GGAGGGACGT GGAGGAGCTG
TACGACGAGG CGGGGCTCGA CGTGGCGCAG CTCAGCGGCG GAGGCCAGAA GAGGAGGGGG
AGGGGGCGGA GGAGGCGATG A
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| Protein sequence | MTGRGLDTLV RELSLAWCRS KGEPSCAVRE EVLAEQAKAA EGIERSDGVI LLKAPTGFGK
TEIWTAPFFA QWLRGEWFAP RLYVVEPMHA LLRQMKRRME VYAQAVQGLG LPRLNVAEDH
GEVAKPLFLY GGHIVLTTVD SLAYGYLARR VQRWREEGVE RGRYSMPAGL LASAYIVLDE
AHLIQDEAYL GPRVLGKIVC DLASAGAKVV ISTATVPETF LKHIPCLGGR LTLGSGTVRR
NVEVERRKGV LKAEEIECGR PTIVIVNTIE RARRIYKQVR CGKKAVVHSL MRREDRERQL
SRVLADGKVA EDAVLIGTQA LEVGLDFSNL RALYTETAPV DALIQRIGRV GRDGGKAEAY
IYEAEGDAPY PQTLMQATRE ALEEELRGGA ALTSWEDAQR AVDRVYNEKA VEELMTRGLA
WYGQALGYLQ ELSLFSYPPR GEVRIRPSSY ITLVIADVKQ DGDKGRYITE EDVERGAMKM
SYTSREDPRI NALLQKVSTA YTVRGIATAK DETLYYLSEL RGGWDGVEVV VVDRRDVEEL
YDEAGLDVAQ LSGGGQKRRG RGRRRR
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