Gene Tneu_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1100 
Symbol 
ID6165571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp986098 
End bp986838 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content67% 
IMG OID641668252 
ProductABC-2 type transporter 
Protein accessionYP_001794477 
Protein GI171185558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00425239 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00015918 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGCTCG GCAACGTCCT GGTCATCGCC AAATACATGG TGCTCGCCAC GAGGGGGTGG 
CACATAACCC TGGCGTGGTT CATGGTGCCC TACCCCCTCC TCTGGCTGTG GCTACTGAAG
CTGGTGGGCT ACCCAACCTA CGTCGAGCAC TTCGTCGTGG GGACCGTCCT CTCCACCGCC
TTCCAGATGC CCTACGTCGT CACCGCCCAA GACGTCGCCT CCATGAAGCA CTGGTCTAGG
CAGTACTCCC TCCTCCTGGC AAACGGCGCA GACCACTTGG AGATAGCCCT CAGCTACCTG
GCCCAGTCCA CGGCGACTAC GGCGGGCGCC TCCGTCCTGT TGCTGGCCGC CTCCGCCGCC
GTCGCCGGCG TGGCCTACGG CCCCGCCCAG GTGGCGGCCG CGGCCGGGGC CTCCGCCCTC
ATCTCGGCAG CCTCCTGCCT CCTCGGCTAC GCCCAGGCGA TAGGTATAAG AAACCCCGCG
TTGTCCCAGC AGATGGCCCA GATCGTGCCG TTGCTCCTCA TCTTGGTAGC CCCCGTGTAC
TACCCCGCGG ACCTCCTCCC AGAGCCTCTG AGGGCCGCCA GCCACCTCCT CCCCACCACC
TACATGGCCT ACGCCCTCCG CGGCGCCCTC GCGCTGAACC CCGAGGAGGC CGCCAGAGGA
GCCGCGGGCA TCCTGGCATA CGCCGCCGCC TCGGCGCTTG TGACGATATA CGCCGTGAGG
AGGGAGCAGA GACATGGCTA G
 
Protein sequence
MRLGNVLVIA KYMVLATRGW HITLAWFMVP YPLLWLWLLK LVGYPTYVEH FVVGTVLSTA 
FQMPYVVTAQ DVASMKHWSR QYSLLLANGA DHLEIALSYL AQSTATTAGA SVLLLAASAA
VAGVAYGPAQ VAAAAGASAL ISAASCLLGY AQAIGIRNPA LSQQMAQIVP LLLILVAPVY
YPADLLPEPL RAASHLLPTT YMAYALRGAL ALNPEEAARG AAGILAYAAA SALVTIYAVR
REQRHG