Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1100 |
Symbol | |
ID | 6165571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 986098 |
End bp | 986838 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641668252 |
Product | ABC-2 type transporter |
Protein accession | YP_001794477 |
Protein GI | 171185558 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00425239 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00015918 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGGCTCG GCAACGTCCT GGTCATCGCC AAATACATGG TGCTCGCCAC GAGGGGGTGG CACATAACCC TGGCGTGGTT CATGGTGCCC TACCCCCTCC TCTGGCTGTG GCTACTGAAG CTGGTGGGCT ACCCAACCTA CGTCGAGCAC TTCGTCGTGG GGACCGTCCT CTCCACCGCC TTCCAGATGC CCTACGTCGT CACCGCCCAA GACGTCGCCT CCATGAAGCA CTGGTCTAGG CAGTACTCCC TCCTCCTGGC AAACGGCGCA GACCACTTGG AGATAGCCCT CAGCTACCTG GCCCAGTCCA CGGCGACTAC GGCGGGCGCC TCCGTCCTGT TGCTGGCCGC CTCCGCCGCC GTCGCCGGCG TGGCCTACGG CCCCGCCCAG GTGGCGGCCG CGGCCGGGGC CTCCGCCCTC ATCTCGGCAG CCTCCTGCCT CCTCGGCTAC GCCCAGGCGA TAGGTATAAG AAACCCCGCG TTGTCCCAGC AGATGGCCCA GATCGTGCCG TTGCTCCTCA TCTTGGTAGC CCCCGTGTAC TACCCCGCGG ACCTCCTCCC AGAGCCTCTG AGGGCCGCCA GCCACCTCCT CCCCACCACC TACATGGCCT ACGCCCTCCG CGGCGCCCTC GCGCTGAACC CCGAGGAGGC CGCCAGAGGA GCCGCGGGCA TCCTGGCATA CGCCGCCGCC TCGGCGCTTG TGACGATATA CGCCGTGAGG AGGGAGCAGA GACATGGCTA G
|
Protein sequence | MRLGNVLVIA KYMVLATRGW HITLAWFMVP YPLLWLWLLK LVGYPTYVEH FVVGTVLSTA FQMPYVVTAQ DVASMKHWSR QYSLLLANGA DHLEIALSYL AQSTATTAGA SVLLLAASAA VAGVAYGPAQ VAAAAGASAL ISAASCLLGY AQAIGIRNPA LSQQMAQIVP LLLILVAPVY YPADLLPEPL RAASHLLPTT YMAYALRGAL ALNPEEAARG AAGILAYAAA SALVTIYAVR REQRHG
|
| |