Gene Tneu_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1081 
Symbol 
ID6165832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp965554 
End bp966696 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID641668233 
ProductAAA ATPase 
Protein accessionYP_001794458 
Protein GI171185539 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0976965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG CCTTTCGCGG AGTTACCGCC ATCTACGGGA GGCCCGGCGC GGGCAAGACG 
AGCCTCGCGA TGCGTATAGC CCACGGCTAC CTCGCCGCCG GCAAGAAGGT GCTGTGGGTA
TCCCTCTATG AGGACAAGGA GACCTTTCTC GCAAACGCGG CTAAGCTGGG GTACGACCTC
TCCCGGGCCG AGTTCTGGGA CATGATCTTC GTCAAGCCGG ACGTGATACT GAACCAGATC
ATATCCGCCA TCTCGCAGGG GGAGTACCAC CTGGTGGTCG CCGACTCCCT CTCAGCCCTC
GTGGAGGAGG GCCAGAGCAG GGAATGGCTC ATCAACGCGG TGTATAGGGT CTTCAAGCCG
GCCAACATAG ACTTCGTGGG GATCGCCGAG GAGGAGACCG TGACGCCTCT CGACTACATA
GCCGACAACC TCATCCGCCT GGAGCTCAAG ATGGAGAACG GCGTCGCCGA GAGGAGGATG
TACGTGGTGA AGTCCAGGGG GAGGAGGGCA GGCTACTACG TGGAGTTCGA CATCTTGGAG
GGGAGGGGGG TGGTCTTCAT CGACGAGCTC CCCCAACCCA GGAGGAGGGC GCCCTGGGGC
AAGTGGCTGG ACTCCCTCTC CAAGGCCTTC GGCCCCATAA AGGGCGGCTG CGTCTACCTC
TTCTACGGCA GAGCCGCCAC TCCTCTTCTG GCGAAGGCCG CCGCCGAGCT CTCCAGGGAG
GGCTACAAGG TGCTCTACCG TGTTTTCGCG GGGGACCCCG CCGCCGTGGC GTCGCTGATT
GAGAAGTTCG GGGGGCGTGC CACCGTCCAG AGGGCCGCCC CGGCGCCCAT GAGCCACTTC
GCCCACGTCA AAAGCTTCTA CGAGGCCCTC GCCGAGACCG ACGCCGACGT CGTCATCTCA
GACGGGGTAG ACGTGGAGTT CCTCGTCTAC GGGAAGAAGG CCTTCGAGAT CAACCGCTTC
GAGGCCGAGG AGCTGAAGAG GTTGGGCATA GCTCTCCTGG CGAGGGCCGA CCGGGACTAC
GGCTTGAGGT ATATTGCAGA CGCGGTGGCG GCGGTCGGAA AAGAGAAGGC CGTGGTCTAC
ACCCCCGCCG GCGTCGCCGA GTGCCGCTAC GAGACGCAGC CGGAGCCCCG CCTCGCCTGC
TAG
 
Protein sequence
MDLAFRGVTA IYGRPGAGKT SLAMRIAHGY LAAGKKVLWV SLYEDKETFL ANAAKLGYDL 
SRAEFWDMIF VKPDVILNQI ISAISQGEYH LVVADSLSAL VEEGQSREWL INAVYRVFKP
ANIDFVGIAE EETVTPLDYI ADNLIRLELK MENGVAERRM YVVKSRGRRA GYYVEFDILE
GRGVVFIDEL PQPRRRAPWG KWLDSLSKAF GPIKGGCVYL FYGRAATPLL AKAAAELSRE
GYKVLYRVFA GDPAAVASLI EKFGGRATVQ RAAPAPMSHF AHVKSFYEAL AETDADVVIS
DGVDVEFLVY GKKAFEINRF EAEELKRLGI ALLARADRDY GLRYIADAVA AVGKEKAVVY
TPAGVAECRY ETQPEPRLAC