| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0780 |
|---|
| Symbol | |
|---|
| ID | 6164324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 699421 |
|---|
| End bp | 700518 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641667938 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_001794165 |
|---|
| Protein GI | 171185246 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.151802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.220812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCT TCGGAAGAGA GCTCCGGATA ACCACCTTCG GCGAATCCCA CGGCAAGGCC
ATAGGCGTGG TGATAGACGG CGTGCCGGCT GGGCTGGAAC TGACGGAGGA GGACATCAAG
AGGGAGCTGG AGAGGAGGAT GTTCTGCCAC ATACCAGTCC TCAACCCGAG GTGCGAGCCG
GAGGAGGTGG AGATACTATC CGGCGTGAAG GAGGGCTACA CCCAGGGCAC CCCCATAGCC
GTCGTGATAT GGAACAGACG CGTCATCTCC AGCTACTACG AGGAGCTCTG GATGAAGCCC
AGGCCGGGCC ACGCCGACTT CGCCTACTAC CTCAAATACG GCAGACACTA CGACCACAGG
GGGGGAGGCA GAGCCTCCGG TAGAACAACC GCGGCTGTGG TGGCGGCGGG GGCAGTCGCC
AAGAAGATGC TCGCCCTAGC CGGCGCCGAG GTGGCCGGCC ACATAGTCGA GCTAGGCGGC
GTCGAGATAA ACGCCAGCTA CACCTACGAA GACGTCAAAA AAAGCTGGGG GCGGCCCCTC
CCCGTGGTGG ATCAACAAGC CCTAGACAAA ATGCTGGAAA AGATCCGGGA GGCCGCCATG
AGGGGAGACA GCATAGGCGG GGGGGTGGAG GTCTGGGCCG TGGGGGTGCC GCCCGGCCTG
GGGGAGCCCC ACTTCGGCAA GATAAAAGCC GACATAGCCG CCGCCGCCTT CTCCATACCA
GGCGCCATAG CGCTCGACTG GGGCATGGGC AGAGCGCTGG CGAAGATGTG GGGAAGCGAG
GCCAACGACC CCATAACAGT CGCCAACGGC AGGCCAACCC TCGCCACCAA CAAAATCGGC
GGCGTCCTCG GCGGAATAAC CGTGGGAACC CCCATATACT TCAGAGCCTG GTTCAAGCCC
ACCCCCTCCG TCAGAAAGCC GCAGCAGACG GTGGACCTAG CCAAGATGGA GCCTACGACG
ATAGAGTTCA AGGGGAGATA CGACGTGTCC ATAGTCCCCA AAGCCCTCGT GGCGCTGGAG
GCCATCACGG CGGTAGCACT CGCCGACCAC CTACTCAGGG CAGGTCTCAT AAGAAGAGAT
AAGCCGCTGG GGAGATAG
|
|---|
| Protein sequence | MNTFGRELRI TTFGESHGKA IGVVIDGVPA GLELTEEDIK RELERRMFCH IPVLNPRCEP
EEVEILSGVK EGYTQGTPIA VVIWNRRVIS SYYEELWMKP RPGHADFAYY LKYGRHYDHR
GGGRASGRTT AAVVAAGAVA KKMLALAGAE VAGHIVELGG VEINASYTYE DVKKSWGRPL
PVVDQQALDK MLEKIREAAM RGDSIGGGVE VWAVGVPPGL GEPHFGKIKA DIAAAAFSIP
GAIALDWGMG RALAKMWGSE ANDPITVANG RPTLATNKIG GVLGGITVGT PIYFRAWFKP
TPSVRKPQQT VDLAKMEPTT IEFKGRYDVS IVPKALVALE AITAVALADH LLRAGLIRRD
KPLGR
|
|---|
| |