Gene Tneu_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0779 
Symbol 
ID6164673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp698013 
End bp699296 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content60% 
IMG OID641667937 
Productamino acid permease-associated region 
Protein accessionYP_001794164 
Protein GI171185245 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.047573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0991739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTTCC GCGAATGGCT GAGGAGGAGG TTGGGCACTT GGGATATCTA CGCCCTAGTC 
CACCACGACT CACAGTCCAC CTTCTACCTA ATGGCGGGCT TCATCCTCCT CGCGGCTGGT
CAGTACGGGC TTTTCGTCAT GTTGTACAGC GCCGCCCTGT TGATAGCGGT TGCGCTGGCC
TACGGAGAGA TGGGGTCGAG GTTCCCGGAG ACGGGCGGCT CCTATCTACA TGTGAAAATC
GGGTTGGGCA ACCTGGGCGC CTTCACCGCG GTCTGGCTAC TCGCGATAGA CCAGATAATC
ATGGTCGGCT ACGGAACCCT AGACGCCTCC AAGTACATAC TGGCCTACAG CGGCTTGGCC
ATACCTCCGC AGGCCCTTGC CATAGCCCTC TCCACCGCGC TCTACATCCT CGCCCTGGTG
GGGATAAAAG AGTCGTCGCG GGTCGGCCTG GCCGTATTTA CCGCAGAGGC CGCGGTGATG
ACAGCCCTAC TCGCCGCCGT CTTCACGAAA TTCGGCGCGC CGCCCCCCTA CTTCAGCTGG
CGCGGCGTAG AGCCGCAGAA CCTCCTCTAC GCCTTCTCCC TCGCCTCCAG AGGCTACACT
GGCATAGACG CGATCGGGCA ACTAGCCGGC GAGGCCACGG CCCCCCTCAT ACAGATACCC
AGAGCGGCCG CCATTGCGGC GGCCGTCGGC ACCACATACG GCCTCCTGCT CTCGTCCGCG
ATAATGTCCG CCCTAACGCC CGCCGAGATA AAAGACCCAG CGCTAGTCAT GCTACAGCTA
GCCCAAAAGG TCGCCCCCCC GATGGAGACC CCAGTCTTCG CGGTCATAGT CATGATAATG
TTGATGGCCG CCCTCACCGG ATACGTGGCC TTCGCCCGCC TAATCTACAT ACTGGCGGAC
GAAAAGCTCC TACCCCCACA CTTCGCGAAA TTACACAGGA GATTCAGAAC CCCCTACGTC
GGACTCACCT TCACCTACGT AGTCTCCATA CTCTTCCTCC TCCCCGGGGA GATAGAGCTA
CTGGTAGACA TCTACGCCGT GGGGTCCCTA ATAAACTACC TAATGATAGC CCTCTCCCTA
GGACTCGTCA CAAAACGCGG CATCCTACAC AGCGCCTTCA GATCGCCACG CATACGCGGG
TTCCCCACCA CCTCAATCGC CGCCACAGCC CTCACAGCCA CAGGAATAGC GTTCACAGCC
ATCGAAAAAC TACCATACCT ATGGTTCCTC GCCCTGTGGC TAGCCTTCGG ATACCTCCTC
TACGCCGCCA CAAGAAAACG CTAG
 
Protein sequence
MAFREWLRRR LGTWDIYALV HHDSQSTFYL MAGFILLAAG QYGLFVMLYS AALLIAVALA 
YGEMGSRFPE TGGSYLHVKI GLGNLGAFTA VWLLAIDQII MVGYGTLDAS KYILAYSGLA
IPPQALAIAL STALYILALV GIKESSRVGL AVFTAEAAVM TALLAAVFTK FGAPPPYFSW
RGVEPQNLLY AFSLASRGYT GIDAIGQLAG EATAPLIQIP RAAAIAAAVG TTYGLLLSSA
IMSALTPAEI KDPALVMLQL AQKVAPPMET PVFAVIVMIM LMAALTGYVA FARLIYILAD
EKLLPPHFAK LHRRFRTPYV GLTFTYVVSI LFLLPGEIEL LVDIYAVGSL INYLMIALSL
GLVTKRGILH SAFRSPRIRG FPTTSIAATA LTATGIAFTA IEKLPYLWFL ALWLAFGYLL
YAATRKR