| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0662 |
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| Symbol | |
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| ID | 6165270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 594305 |
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| End bp | 594979 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641667815 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001794047 |
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| Protein GI | 171185128 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.550294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGATTG TCGTAACTGG GGCAAGCGGG GGGATAGGGG GCACCCTCGT CAGATTGGCT
AAAAGCCGCG GCGACTATGT GGTTGGGATC TCCAGGGAGA GGTCAGACGC CGACGTCCAC
TACAGATGCG ATGTGCTTGA CGTGGCGTGC CTGAGGGGGG TGGCGGAGGA AGTGGGGAGG
GTAGACGGCT TGGCTCTGGC CCACGGCCAC GGGGAGGAGG GACTGTGGAA GAGAGATGTC
GCGTCGTTGT CGGCCGAGGA TCTCCTCGAC GTCTTTAGAG TCGACGTCGT GGGGAGCTTC
AACGCCGTTA AGGCCTTCCT CCCGGCTCTG GGCCCCTCCG CCTCCGTTGT CCTCGTCGCC
TCTACGCCAG GTATAGTCGG CGATAGATAC GGCATACCCT ACGCCGTGGC TAAGGGAGCC
CTCATCGCCT TAGCCAGGAG CTTGGCCAAG GCCCTGGCGC CAATTAGGGT AAACGCGGTG
GCCCTCGGCC CAATAGAGAC CAGGTGGACC AGCTGGGTTA CGCCGGAGGA GCTCGACGAG
TTCAGATCTA GAACAGTGCT AAGAAGGCTG GGGCGGCCTG AGGAGGCCGC CGAGGCGATA
TACTGGCTTC TCTCGCCCGC CTCTAGCTAC GTCACCGGCC ACGTCCTTGT CGTTGACGGC
GGCGAATCCC TATAG
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| Protein sequence | MRIVVTGASG GIGGTLVRLA KSRGDYVVGI SRERSDADVH YRCDVLDVAC LRGVAEEVGR
VDGLALAHGH GEEGLWKRDV ASLSAEDLLD VFRVDVVGSF NAVKAFLPAL GPSASVVLVA
STPGIVGDRY GIPYAVAKGA LIALARSLAK ALAPIRVNAV ALGPIETRWT SWVTPEELDE
FRSRTVLRRL GRPEEAAEAI YWLLSPASSY VTGHVLVVDG GESL
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