Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0193 |
Symbol | |
ID | 6165458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 171217 |
End bp | 171948 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641667358 |
Product | transposase IS605 OrfB |
Protein accession | YP_001793595 |
Protein GI | 171184676 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.822402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTACTT ACTACCTGAG GTGCGAAGTG GAGAAGGCGA GGGAGGCGAT AGACGGCGAC TACAGGGTGG TGGAGCTGGG GGGCGCGGTT AGGTTAGTGG ACAGCTTCGT CGCGCTTTAC TCCGGCGATC TGCCCCTCTG CATGTACAAA AGCTGGAGGA TGACGTACAC AGACCCCGCC CAGTTCGGGG TCACAAAGGC CGAGGTCCTC CTTAGGAAAG ACGGCGCCGT GGTGAGGTTG GTGAGGCCAG ACGAGAAGGT GGGTCTTCCC GAGCTCGTCG AGGGGTCGCC CTTCGTGGTA CATGCCATGG ACGTCAACGA GGGCGGGGTC ATGTACCGCG TCTTCCGCAT GGGGGGATAC GTGGAGCTCG CCGGGAAGGG GATCGCCGGC GGGATAAAGG AGGCGTTCCA CCCCAAGAAG GGGGTAAACA TCGTAATTGT GGACCTCCCC ATCGCGCCGA AGTTCCAACA CCTACTGGAG GAGGTCTTCG ACCTAGCGAG GGAGCACTAC GTGGAGCTCC ACACCACCAT GATCTCAGAC GTGTGCCCCC TCTGCGGGGG GAGGATGGAG AAGCGCGGCA GACTCGTGAG GTGTCCCACG TGTAAGATCC AGCTGAACAG AGACGTCAAC GCCGTCTGGG CGCTTGCTAG AAACATCGTG AGGCGGCTGG GCCGCGAGCA ACAGCTGGCC GAGCTACGGG AGATCTTCCG CCTGTACTAC CCAAACGTAT AA
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Protein sequence | MFTYYLRCEV EKAREAIDGD YRVVELGGAV RLVDSFVALY SGDLPLCMYK SWRMTYTDPA QFGVTKAEVL LRKDGAVVRL VRPDEKVGLP ELVEGSPFVV HAMDVNEGGV MYRVFRMGGY VELAGKGIAG GIKEAFHPKK GVNIVIVDLP IAPKFQHLLE EVFDLAREHY VELHTTMISD VCPLCGGRME KRGRLVRCPT CKIQLNRDVN AVWALARNIV RRLGREQQLA ELREIFRLYY PNV
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