Gene Tneu_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0193 
Symbol 
ID6165458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp171217 
End bp171948 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID641667358 
Producttransposase IS605 OrfB 
Protein accessionYP_001793595 
Protein GI171184676 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.822402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTACTT ACTACCTGAG GTGCGAAGTG GAGAAGGCGA GGGAGGCGAT AGACGGCGAC 
TACAGGGTGG TGGAGCTGGG GGGCGCGGTT AGGTTAGTGG ACAGCTTCGT CGCGCTTTAC
TCCGGCGATC TGCCCCTCTG CATGTACAAA AGCTGGAGGA TGACGTACAC AGACCCCGCC
CAGTTCGGGG TCACAAAGGC CGAGGTCCTC CTTAGGAAAG ACGGCGCCGT GGTGAGGTTG
GTGAGGCCAG ACGAGAAGGT GGGTCTTCCC GAGCTCGTCG AGGGGTCGCC CTTCGTGGTA
CATGCCATGG ACGTCAACGA GGGCGGGGTC ATGTACCGCG TCTTCCGCAT GGGGGGATAC
GTGGAGCTCG CCGGGAAGGG GATCGCCGGC GGGATAAAGG AGGCGTTCCA CCCCAAGAAG
GGGGTAAACA TCGTAATTGT GGACCTCCCC ATCGCGCCGA AGTTCCAACA CCTACTGGAG
GAGGTCTTCG ACCTAGCGAG GGAGCACTAC GTGGAGCTCC ACACCACCAT GATCTCAGAC
GTGTGCCCCC TCTGCGGGGG GAGGATGGAG AAGCGCGGCA GACTCGTGAG GTGTCCCACG
TGTAAGATCC AGCTGAACAG AGACGTCAAC GCCGTCTGGG CGCTTGCTAG AAACATCGTG
AGGCGGCTGG GCCGCGAGCA ACAGCTGGCC GAGCTACGGG AGATCTTCCG CCTGTACTAC
CCAAACGTAT AA
 
Protein sequence
MFTYYLRCEV EKAREAIDGD YRVVELGGAV RLVDSFVALY SGDLPLCMYK SWRMTYTDPA 
QFGVTKAEVL LRKDGAVVRL VRPDEKVGLP ELVEGSPFVV HAMDVNEGGV MYRVFRMGGY
VELAGKGIAG GIKEAFHPKK GVNIVIVDLP IAPKFQHLLE EVFDLAREHY VELHTTMISD
VCPLCGGRME KRGRLVRCPT CKIQLNRDVN AVWALARNIV RRLGREQQLA ELREIFRLYY
PNV