Gene Tneu_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0125 
Symbol 
ID6166076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp111605 
End bp112723 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content68% 
IMG OID641667291 
Producthypothetical protein 
Protein accessionYP_001793528 
Protein GI171184609 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0190029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00579103 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGATGG ATTTGTCTAC TGCGAGGTCG CGGGGCCTTG AGTTGGCCGG CAAACTGCCC 
TGGCAGGAGG TGGCGGATTC GCCCACCATT AGGTACTACA CCGACTGGTC CAGGTTCGAG
GGGTTTAAGC CGTCTGCCGG GACGAGGCCG CGGCCCGCCT CCCCGGCCCC CTGCGAGGTT
GTGGTGTCGG GGGGCTACCT CGCGGGGCGG GGGCCCTGCG GCGGGGTGGA GGTGGATGCG
GCTGGCGAGG TCTTTAGGAG GCTTGACATC GGCAGTAGGA TCCTGGCGCT TCACGCCTCT
GCCCTTTCCG AGGCCGTGCG GGTGAGGGTG GCGGGGAGGG TGGAGCCGTT GGTGGTTAAG
CTCGTGGCGG ATTCCCCGGG GAGCCACGTG GCGAGCCACG TCATCCTGGA GGTGGAGGAG
TCGGCGTCTG GGTCGGTGGT GGTCTACGTC GAGGGCAACG TGGGGACCAT GCACACGGCC
GTGGTGGAGG GGGAGGTCAG GGGGGCCGTC GAGTACGTCC TCGTGTCGAG GGGGGGCGGG
CCTCAGTACG TCCACTCGGC GCTTGCGGTG GGGTCGCAGG TCTACGCGAG GCCTCTGGTG
CTCGGGGGCG TCATGAACGC CGTGAGGGAG GAGTACGTGG TGGCGGCTGG GGCCTCGGCC
GAGGTTGTAG GTATGGAGCT GGGCTACGGC GAGAGCAGGA TAGACCACGT GGTTTCCGTC
GTAAACGACG CGCCGAAGGG GAGGGGCTTC GCCAGGCTCT ACGCCGTTGC GGCAGACAGA
TCGTTCGTGG CGCAGCGCGC CGTTGGGAGG ATCACGCCTA GGGGGGCCGG AAGCGAGAGC
GCGGTGGAGG GGGTGGTGTA TATAGCTGGG GAGGGCGCCG TGGCCAACTC CCAGCCGGTT
ATCCTGGTGG AGACCGGCGA CGTGGAGGGG GCTAGGCACT CCGCCGCAGA CGCCGCGTTG
GACGAGGAGA AGGAGTTCTT CCTCAGATCG CGCGGGGTGA GGAGGGAGCA CATCCCGAGG
CTCATCATGG CGAGCTTGGT CGACCAGTAC CTGTCTTCTC TGTCTGAGGG GGCGAGGGGC
TTCGCGGAGG CCGTCGTGAG GTCGGCCGGG CTCCTCTAG
 
Protein sequence
MSMDLSTARS RGLELAGKLP WQEVADSPTI RYYTDWSRFE GFKPSAGTRP RPASPAPCEV 
VVSGGYLAGR GPCGGVEVDA AGEVFRRLDI GSRILALHAS ALSEAVRVRV AGRVEPLVVK
LVADSPGSHV ASHVILEVEE SASGSVVVYV EGNVGTMHTA VVEGEVRGAV EYVLVSRGGG
PQYVHSALAV GSQVYARPLV LGGVMNAVRE EYVVAAGASA EVVGMELGYG ESRIDHVVSV
VNDAPKGRGF ARLYAVAADR SFVAQRAVGR ITPRGAGSES AVEGVVYIAG EGAVANSQPV
ILVETGDVEG ARHSAADAAL DEEKEFFLRS RGVRREHIPR LIMASLVDQY LSSLSEGARG
FAEAVVRSAG LL