Gene Tneu_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0112 
Symbol 
ID6166226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp95877 
End bp98417 
Gene Length2541 bp 
Protein Length846 aa 
Translation table11 
GC content66% 
IMG OID641667279 
Producthypothetical protein 
Protein accessionYP_001793516 
Protein GI171184597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0116921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTGGC TTGTTCCTCT TCTGCTGGCG GCTCTTGCCT TCGCCTACGT GGTCCCCTCG 
GAGGGTCTCG ACGTCTACTG GTGGGCCGCG CCCGACAAGG TGGCCGGCGT CGGCATAGAC
GGGAGAACTC TGTGGCAGAT CGACGCGGTT TCCCCCCTGG CGGCGACGGA CCAGGTGGGG
AGGTGTGTGG CGGTGGTCAA CAGGCCGTAT CTCTACGTGG TGAGGCAACA GCCTATGGAG
CTTAGGGTTT CTATTCCGGC TACTGTCCAG CTTTCTCCTG ACCTCGTCAG CACTTTGAGC
CAGTACGGCA TCTCCTTCCC AAGCACTGTC AACGTGGTGC TTAACTTCAC CATCCCCCTG
CCGCCGCTTG TTTTGGCGAG CGTCTACAAG ACGTCGGTTG CCTCGCTTCA CACGCCCTAT
GGCTACCCCC TGTGGGCCGT CTCGCTTGGG CCTAGGGTGA ACGCCACCGC CGTGGCCACA
AACTGCCGGG ATGTGGCCGT GGGGACGATT TCGGGGGAGG TCTACGTGCT TAGGGATGGG
AAGGTGTACG CCGTGTATAC ATACGGCGAG CCGGTGACCG CGCTTGCCTA CGGCCGGGAC
GTCTTGTACG TCGGCACCGC CGGGGGCAAG ATCTACGCCG GGGGGAGCCT CGTCGGGTCG
TGCTCCGGTT CTGTGTACTA CCTCGCAATG AGGCCGGACG GGAGCCCCGT GGCGCTCTGC
TTCTCCAAGG GGGCGGTCCC CACTGTCGAG TACTACCCCT ACGGCGTTAG GCTGACCCCC
TCCTCCTACG TGGACTACGG GATAGATACG CCGAAGGTGC CGGCGGCGCT GAGCCAAGAC
GGCTCTCTCT TCGTCGCGGC TACCCAGGGC TACGTGGTGG CGTTTAGCGG GGGGCGCGAG
CTGTGGAGGG CGAAGGCCCC CTCTCTGCCC ACTGCGGTGG CGGCCTCCAA CAACGGGTCT
ATCGTCGTTG TGGGCACCCT AGGCGGCGAC GTCTTGGTGT ACTGGAACGG GAGGGAGGCG
GCGAGGTTCC TCGGCTCGGC CCCCGTCACC TCCGTCGCCG TATCCGCCGA CGGGAGGGCC
CTGGCGGTGG AGCGGTGGAA CACGGTCTCC GGCTTTAGGA TCGCCTTCGC CGCGGTGCGC
GTCTCGGCGC CTCCCGAGTG CCTCCCCGCC GAGGTGCAGG TGGCGGTGGG CGGCTCGGTG
TATAGGTACC TGGTGTCCGG CTCCGGCGTG GTGCTCCTTC CTGTGGGCGA CGTGACGGTG
GCGCCCCAGT ACAAGTACCT AGGCGACTTC AGGTGCCGCC CCTTCGGCAA CGTGACGCTG
GCGGTGAGGG GGGATCTGGA GAGCCCCATC GAGATAGGCT ACGTCAAGGA GTATAGGGTG
CACCTCTCCC CTCCGAACAT AACGAGGGGC CCCGCCTGGG CCGCGGGGCC AGCCACCTTC
TTCGCAGAGC CCAGCGTAAA CGTGCCGGTC TATAACTCGC CGGTTTCCTC CGGCCGCCTC
GTCCTAGTTG GCTGGGAGGT AGATGGCAGG AGGATAGATC TGCCGACCCC CACCCTCTCC
GTCAACGTGG AGGGGCCGAC GACGGTCAAG GCCATATACA GGGTTGAGCT GCCCCAGGCC
GTGCCTATAG ACGAGCAGAG GCGCTACTGG CTGAAGACCG TGCTGGTCTT CGACGCCTTT
GGGAACCCCG TGGCCTCCGG CGTAGCCCCC GAGGTGTCCA TCTACCCGGT GGTGGTGAGG
GGGGTCTACG TCGAGCAGTA CAGGGTGCGC ACCTACTACC CCGCCACGGT CAACGGCTCC
GACACGCTGT GGGCCGAGGC CGGGACTAAG GCGGTGTTTT ACGCCCCCGA CGTGGAGTTT
AGAAACGGGA CGAGGCTGGC CTTCGTCAGG TGGAGGGAGG CCGAGTCGAG GGAGCGGACC
CTTGCCGTCA CTGTCGAGGG CCCAACGACG CTTACGCCCA TATACGTCAC TCAGTACAGG
GTGTGGGTGA AGCCGCCGGC TCAGGTGGTG GAGCCACCGA ACGCCACCTG GGCAGACCGC
GGCTCTGTGA TAAGGGTGGC GGCGCCTCCC GTGTTGAACC AGAGCGGCGA CGTCAGAACT
GTGGTTGGGC AGTGGCTGGT TAACGGCCTT CCCAACGCCA CGGGCGCCGT AGCGTCGTTT
AGGGTGACGG CGCCGCTCAA CATAACCTAC GTAGCGAAGA GGCAGTACCT GGTAACCTTC
GTCTCGGCCT ACGGCACGCC GCCCCCGCCC ATGTGGGTCG ACGAGGGGTC CACGGCGTCT
GCGGTGCCTA CGCCGATGGA CGTCTGGTCG CCCCCGCCGC TGCACTGGAA GTTCGTCGGC
TGGAGAGACA AGGCGACGGG CACCGTCTAC AGCTACCCCC AGATGCCCTA CGTCTACGGC
CCCGCCACCT TCGAGGCCGT CTGGGCCCTA GACCCACTGC CTCTAGCCGC AATAGGCGGC
GGGGCAGCCG CGGCGGCGTT CGCCGTGTGG TTCCTGAGGA GGCGGCGCCT GGCGAGGCTG
ATGGCCGAGG TGGCGGAGTA G
 
Protein sequence
MRWLVPLLLA ALAFAYVVPS EGLDVYWWAA PDKVAGVGID GRTLWQIDAV SPLAATDQVG 
RCVAVVNRPY LYVVRQQPME LRVSIPATVQ LSPDLVSTLS QYGISFPSTV NVVLNFTIPL
PPLVLASVYK TSVASLHTPY GYPLWAVSLG PRVNATAVAT NCRDVAVGTI SGEVYVLRDG
KVYAVYTYGE PVTALAYGRD VLYVGTAGGK IYAGGSLVGS CSGSVYYLAM RPDGSPVALC
FSKGAVPTVE YYPYGVRLTP SSYVDYGIDT PKVPAALSQD GSLFVAATQG YVVAFSGGRE
LWRAKAPSLP TAVAASNNGS IVVVGTLGGD VLVYWNGREA ARFLGSAPVT SVAVSADGRA
LAVERWNTVS GFRIAFAAVR VSAPPECLPA EVQVAVGGSV YRYLVSGSGV VLLPVGDVTV
APQYKYLGDF RCRPFGNVTL AVRGDLESPI EIGYVKEYRV HLSPPNITRG PAWAAGPATF
FAEPSVNVPV YNSPVSSGRL VLVGWEVDGR RIDLPTPTLS VNVEGPTTVK AIYRVELPQA
VPIDEQRRYW LKTVLVFDAF GNPVASGVAP EVSIYPVVVR GVYVEQYRVR TYYPATVNGS
DTLWAEAGTK AVFYAPDVEF RNGTRLAFVR WREAESRERT LAVTVEGPTT LTPIYVTQYR
VWVKPPAQVV EPPNATWADR GSVIRVAAPP VLNQSGDVRT VVGQWLVNGL PNATGAVASF
RVTAPLNITY VAKRQYLVTF VSAYGTPPPP MWVDEGSTAS AVPTPMDVWS PPPLHWKFVG
WRDKATGTVY SYPQMPYVYG PATFEAVWAL DPLPLAAIGG GAAAAAFAVW FLRRRRLARL
MAEVAE