| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4380 |
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| Symbol | |
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| ID | 6161033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4898598 |
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| End bp | 4899362 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641667157 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_001793396 |
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| Protein GI | 171061047 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4305] Endoglucanase C-terminal domain/subunit and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0735735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCC ATCCCCGCCG CTTCCCGCAC CGCATGCTCG ATCTCGAATC CGCGCTCAAG
CGCCTCGCCT GCCTCTGCAC GCTCGCCGGC CTCGCGGCCT GCGGTGGCGG CAGCCCTCTG
GCCGCAGCCA GCCCGACCGT CGACACGGAC GGCGGCGGCA CCGGCGCCAC GCTGGGCGCC
ACGCGCCAGG GCGAAGGCAC CTACTACGCC GCCACCGGCG CGGGGGCGTG CAGCTACGAC
GCCAGTGCCG ATCGGATGGT GGCGGCCATG AATCACACCG ACTACGCCGG CAGCGCCGCC
TGTGGCGAAC ACGTGCGCGT CACCGGCCCG CTCGGCACGG TCACCGTACG CATCGTCGAC
GAATGCCCTG AATGCGCCCC CGGCGACGTC GACCTGAGCG CCGAGGCCTT CGCCCGCATC
GCCGAACCGG TGGCCGGGCG CGTGCCGATC ACATGGCAGG TGGTGACGGG CGCCGTCAGC
GGCCCGGTCC AGTACCGCTA CAAGGAAGGC AGCACGCGCT ACTGGACGGC AATCCAGGTG
CGCAACCACC CGGTGCCGAT CGCCCGGCTC GAAATCCAGC CCGACGGCAC CGGCAACTGG
ATCGCCGTGC CGCGCACCGA CTACAACTAT TTCGTCCACC CGGTCGCGAT CGGGGCCGGC
GCGCTGCAGG TGCGCGTCAC GTCGAGCACC GGCGTGGCGC TGATCGACAG GCTGCCGCAG
CCGCAAGGTG GGCTGGTGGT GGATGGGACG GGGCAGTTTC AGTAG
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| Protein sequence | MRRHPRRFPH RMLDLESALK RLACLCTLAG LAACGGGSPL AAASPTVDTD GGGTGATLGA
TRQGEGTYYA ATGAGACSYD ASADRMVAAM NHTDYAGSAA CGEHVRVTGP LGTVTVRIVD
ECPECAPGDV DLSAEAFARI AEPVAGRVPI TWQVVTGAVS GPVQYRYKEG STRYWTAIQV
RNHPVPIARL EIQPDGTGNW IAVPRTDYNY FVHPVAIGAG ALQVRVTSST GVALIDRLPQ
PQGGLVVDGT GQFQ
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