| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4354 |
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| Symbol | |
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| ID | 6160943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4869533 |
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| End bp | 4871062 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641667131 |
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| Product | hypothetical protein |
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| Protein accession | YP_001793370 |
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| Protein GI | 171061021 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAA CCTTTTCGAT CGGGGCGGCG CACTGGGCCT ACCTGCTTGG GGTCGCGGTG
ATCGTCGTGA CGATGATCTT CCGCGCCAAC GTCGTGGTGC CGTCGATCGT CGCCACCTTC
TGCGTTGCCT TGGCCTGGTC GGGCAGTCCG GTCTCGGCCA TCGGCAGCAT CTTCGGCGCC
AGCTTCGTGG CGGCCAAGGA GCTCTTCAAC ATCTTCCTCG TGATCGCGCT GATGACGGCG
CTGCTCAATG CCCTGAAGGG GCTGCGCTCG GACATCCGCA TGGTCGAGCC GTTCCGCGCG
GTGATGAAGA ACGGCCATGT GTCGTACTTC ATCCTGGCTG GCGTCACCTA CTTCATCTCG
CTGTTCTTCT GGCCCACGCC GGCCGTGCCG CTGGTCTCGG CGGTGCTGTT GCCCGCGGCC
ATCGCCGCCG GCCTGCCGCC GCTGGCCGGT GCCGCCGCGA TCGCGATCGC CGGCCAGGGC
ATGGCGCTGT CGTCGGACTA CGTGATCGGC GTGGCCCCCG GCATCAGCGC CAAGGCGTCG
GGCACGGTCG CCGCCGTGGT CGCCGACCGC GCGCTGGTGC TGTCGATGGT GGTCGGCGCG
ATCGCGCTGA TCATGGTCTA CGTCACGCTG CGCAAGCACT TCAAGGCGCC CAGCGGGGCC
CTGCTCGACC AGTGGCAGGC ACAGGCCAGC GAAGGCGGCG CCGTGGCGCA TGACGAAGGC
ACCACCCACA AGGCCGAGAT CGCCCAAGGC ACCCGCCGCG ACGAGCCGCT CTTCAGCGAA
AGCGACATCG ACCGCGAGCT GCACGACATC GAGCGCAAGC GCGTCAAGTG GTCGAAGCTG
TTTGCGGTCA TCACGCCGAT CGCCTTCCTG GGCGTGGTGG CGCTGATGGT GCTGCCCAAG
TTCGTCGGCG GCCTGCCCAC CATCAAGGGG GGCGACGCCG CCTCGCTGGT GGGGGGCATG
GCGGCTGCGC TGATGATCTT CGCCACGCTG GCGATGCACG GCCCGCGCAA GATGCTCGAC
GCCAGCGCCG ACCACATCAC CGAAGGTTTC GTGTTCGCCT TCCGCGCCAT GGGTTCGGTG
CTGCCGATCG CCGGCTTCTT CTTCCTCGGT GCCAGCGAGA CGGCCGCCAG CATCCTCGGC
CTGCCCGCGG ACAAGACGCC CAGCCTGCTG TTCGAGCTGG TGCAGAGCGC GCAGCAGTGG
ATTCCGCACA ACCCCTTGCT GGTCGGCTTC GGCGTGCTGA TCGTCGGCAT GATCACCGGC
ATCGACGGCT CGGGCTTCTC GGGCCTGCCG CTGACCGGCG CGCTGGCCGG CGCGATGGCC
CCGGTCTCGG GTGTCGACGC CGCCACGCTG GCCGCCCTCG GCCAGATGGG CGCCATCTGG
ACCGGCGGCG GCACGCTGAT CGCCTGGTCG TCGCTGATCG CGGTGGCCGG TTTCGCCCGC
GTGCCGGTGC TCGATGCGGT GCGCGTGCTG ACCGTGCCGG TGCTCACCGG CCTGGCGGCT
GCGACGATCT TTGCCGTGAC GTTCTTCTGA
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| Protein sequence | METTFSIGAA HWAYLLGVAV IVVTMIFRAN VVVPSIVATF CVALAWSGSP VSAIGSIFGA
SFVAAKELFN IFLVIALMTA LLNALKGLRS DIRMVEPFRA VMKNGHVSYF ILAGVTYFIS
LFFWPTPAVP LVSAVLLPAA IAAGLPPLAG AAAIAIAGQG MALSSDYVIG VAPGISAKAS
GTVAAVVADR ALVLSMVVGA IALIMVYVTL RKHFKAPSGA LLDQWQAQAS EGGAVAHDEG
TTHKAEIAQG TRRDEPLFSE SDIDRELHDI ERKRVKWSKL FAVITPIAFL GVVALMVLPK
FVGGLPTIKG GDAASLVGGM AAALMIFATL AMHGPRKMLD ASADHITEGF VFAFRAMGSV
LPIAGFFFLG ASETAASILG LPADKTPSLL FELVQSAQQW IPHNPLLVGF GVLIVGMITG
IDGSGFSGLP LTGALAGAMA PVSGVDAATL AALGQMGAIW TGGGTLIAWS SLIAVAGFAR
VPVLDAVRVL TVPVLTGLAA ATIFAVTFF
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