| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4300 |
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| Symbol | |
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| ID | 6162083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4810441 |
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| End bp | 4812177 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641667077 |
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| Product | FAD-dependent oxidoreductase |
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| Protein accession | YP_001793316 |
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| Protein GI | 171060967 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC CCACCGCCGC CGCCGACCGC CCCGCCGTCG ACTACCAGAA GGTGGTCTTC
CCCTACCGGC GCGCCCGCGA CCATGGCGCC TCGCCACCCG CGCGCCACCC GGTGGTGGTG
GTGGGCGCGG GCCCGGTGGG CCTGGCGCTG GCCATCGACC TGGCCGAGCA GGGCGTGCCG
GTGGTGCTGC TGGACAACGA CGACCGCCTG TCCAGCGGCT CGCGCGCGAT CTGCTTTGCC
AAGCGCACGC TGGAGATCTT CGACCGCCTG GGCTGCGGCC AGCGCATGGT CGACAAGGGC
GTGTCGTGGA ACGTCGGCAA GGTGTTCTTC AAGGCCGAGC AGATCTACCG CTTCGACCTG
CTGCCCGAGG CCGGCCACGA GCGTCCGGCC TTCATCAACC TGCAGCAGTA TTACGTCGAG
GGTTACCTGG CCGAGCGCGC CGCCGAGCTG CCGCTGATCG ACCTGCGCTG GAAGAGCGCC
GTGGCGGGCA TCGAGCCGCA TGCCGACCAT GTCGTGCTGA GCATCGACAC GCCCGACGGC
CCCTACCGGC TAGCCGCCGA CTACGTGGCC GCCTGCGACG GCTCGCGCTC GACCCTGCGC
CGGCTGCTCG GCCAGGAGAG CCACGGCCGC GTCTTCCGCG ACCGCTTCCT GATCGCCGAC
GTGAAGATGA AGGCCGCCGG CGTGGGGGCT GTCGATTTCC CGGCCGAGCG CTGGTTCTGG
TTCGACCCGC CGTTCCACCC CGGCCAGAGC GTGCTGCTGC ACAAGCAGCC CGACAACGTC
TGGCGCATCG ATTTCCAGCT CGGCTGGGAC GCCGACCCCG AGGTCGAGAA GCGCCCGGAG
AACATCGCCC GGCGCGTCAA GGCCATGCTG GCGCAGACCG CCATGAAGGA CGCCGACCAC
GCGCTCGAAT GGGCCAGCGT CTACACCTTC GCCTGCCTGC GCATGGACGC CTTCCGCCAC
GGCCGGGTGT TCTTTGCCGG CGACTCGGCG CACGGCGTCT CGCCCTTCGG CGCACGCGGC
GCCAACTCGG GCGTGCAGGA CGGCGAGAAC CTGGCCTGGA AGCTGGCCCA CGTGCTGCAA
GGCCGGGCCG GCGATGCGCT GCTCGACAGC TACGGCCCCG AGCGCGAATA CGCCGCCGAC
GAGAACATCC TGAACTCGAC CCGCGCCACC GACTTCATCA CGCCCAAGAG CGAGATCAGC
CGCCTGTTCC GCGACGCCAC GCTGGCCCTG GCCAAGGTGC ATACCTTTGC GCGTGCGCTG
GTCAACAGCG GCCGGCTCTC GGTGCCCGCC ACGCTGCACG CGTCGCCGCT GAACACGCCC
GACCGCGACC GCTTCGCCGG CCCGATGGTG CCGGGTGCGC CGAGCACCGA TGCGCCGCTG
CTGGATGCCG ACGGCCGCGC CACCTGGCTG CTGCGCGAAC TGCCGTCGGG CCGCTTCACC
GCGCTGGTGT TCGACGGCGA GGGCGCCGCC CAGGCCGTCG CCGCGCTGCG GGCCGTCGCC
GATGCGGACG GGTCGCTGCC GATGCAGGTG CTGCAGGTCC TGGGTGCCGA CGGTGGCCAG
GCCGCCCCGG GCGCCCGTGC GCTGCGCGAC GTCCAGGGCC TGCTGGCGCA GCGCTTCGAC
GCCCGGCCCG GCACCACCTA CCTGCTGCGC CCCGACCAGC ACGTCTGCGC GCGCTGGCGC
ACCGTCACCG CCGCCGATGC ACGCGCTGCG CTGAGCCGCG CGCTGGCGCT GTCCTGA
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| Protein sequence | MSAPTAAADR PAVDYQKVVF PYRRARDHGA SPPARHPVVV VGAGPVGLAL AIDLAEQGVP
VVLLDNDDRL SSGSRAICFA KRTLEIFDRL GCGQRMVDKG VSWNVGKVFF KAEQIYRFDL
LPEAGHERPA FINLQQYYVE GYLAERAAEL PLIDLRWKSA VAGIEPHADH VVLSIDTPDG
PYRLAADYVA ACDGSRSTLR RLLGQESHGR VFRDRFLIAD VKMKAAGVGA VDFPAERWFW
FDPPFHPGQS VLLHKQPDNV WRIDFQLGWD ADPEVEKRPE NIARRVKAML AQTAMKDADH
ALEWASVYTF ACLRMDAFRH GRVFFAGDSA HGVSPFGARG ANSGVQDGEN LAWKLAHVLQ
GRAGDALLDS YGPEREYAAD ENILNSTRAT DFITPKSEIS RLFRDATLAL AKVHTFARAL
VNSGRLSVPA TLHASPLNTP DRDRFAGPMV PGAPSTDAPL LDADGRATWL LRELPSGRFT
ALVFDGEGAA QAVAALRAVA DADGSLPMQV LQVLGADGGQ AAPGARALRD VQGLLAQRFD
ARPGTTYLLR PDQHVCARWR TVTAADARAA LSRALALS
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