| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4296 |
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| Symbol | |
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| ID | 6161780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4806411 |
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| End bp | 4807298 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641667073 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001793312 |
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| Protein GI | 171060963 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTTG CGCAGATTCG CGACTTCCTG GCCGTGGTCG AATCCGGCAG CATTTCCGCC
ACCGCCCGAA TGCTCGGGGT CTCGCAGCCC GGGCTGACCA AGAGCCTGGG GGCACTGGAG
GCCGAACTGG GTGCGTCGCT GCTCAAGCGC ACGCCCAGCG GCGTCACGCT GACCCGACTG
GGGCAGGCCT TCCATGTGAG GGTGCGCGCC GGCTACGCCG AGTTCGCGAA GGCGCAGGAA
GAACTGGCGC GCGGCGGCCA GACCCAGGTG GCACTCGGGT TCGGCCCTTT TTTCGCAGCG
CAGATCGTGC CGCAGGCGGT GATGATCTTC CGCGAGAAGT TTCCGGACGT GCAGTTGCGC
CTGGTGGAGG GCCTCGGGCA TGCAACGCGC CCGCTGGTGC GCGACGCGAC CCTGGACATG
ACCTTGGCGC CGCGCGCGCC GAGCGTCCGT GACGACCCGG CCATGCGCTT CAAGCCGATC
GCGCACCTCG ACCAGATCGT CGTCGCACGC CGGGGCCACC CGTTGGCGCA GGCGCGTTCG
GCCGCCTCGC TCGCCAGTGC CGAGTGGCTG TGCATCGTGC GGCGCGACGT GACGGCCGAG
GCGCTGCGTG CGCTCGGTGT GCCCGAGCCC CGGCGGATCA CGGAATGCGA GTCGTTCAGC
GCCATGCACA CGCTGCTCGC CGGATCGGAC ATGCTGGCCG TGGTGCAACA CCCTTTCCTG
GACATGCCGC AGGTCGGGCA GGCGATCCAG GAGATACCGA TCGCGCAACG CATGCCAGGG
CTGACGGTGG GCCTGCACAT GCGCGCCGAC GCACCGCTGT CCAAACCCGC TGCCGCGCTG
GCCCGACTGG TGTCGGACAT CGGCCGCAAG CTGCTGCAGA AGGGCTGA
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| Protein sequence | MRLAQIRDFL AVVESGSISA TARMLGVSQP GLTKSLGALE AELGASLLKR TPSGVTLTRL
GQAFHVRVRA GYAEFAKAQE ELARGGQTQV ALGFGPFFAA QIVPQAVMIF REKFPDVQLR
LVEGLGHATR PLVRDATLDM TLAPRAPSVR DDPAMRFKPI AHLDQIVVAR RGHPLAQARS
AASLASAEWL CIVRRDVTAE ALRALGVPEP RRITECESFS AMHTLLAGSD MLAVVQHPFL
DMPQVGQAIQ EIPIAQRMPG LTVGLHMRAD APLSKPAAAL ARLVSDIGRK LLQKG
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