| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4281 |
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| Symbol | |
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| ID | 6160628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4790987 |
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| End bp | 4792531 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641667058 |
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| Product | histidine kinase |
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| Protein accession | YP_001793297 |
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| Protein GI | 171060948 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTCTGC TGGCCGTGCT GCTGGCATCG GCCGGCTGCG CCGCCCTGCT GCAGCGTGAC
CAGGCCCGCC AGCGTGACGC CTTCGAAACC CAGGCCCGCA TCGCCCACCG CCTGCTCAGC
CAGCAGGCGG TGCAGCACGA GGCGATGCTC GCCACGCTGG CGCTGCTGCA AGGCCCGGGC
GGCGCATCCG ACGACGCCGA ACAGCGCCTG CCCGCGATCT TCCCGTCGGT GCTGCGGGTA
TCACGCCGCG AGCCCGGCCA GGCCTGGCCG ACGCCACCCG GCAATGCCGA CCCACAAGCC
CTGAGCGACG CCGAACAGCG CTCGCAACGC AGCGGCCGCG CCGAACTGGT CACGCCCGAC
GCGGCCCAAT TCAGCGCCGG CCGCTTCGTC ATCGTGCAAG CCAGCCAGAG CGCCGCCGTG
GCGGTGCAGA TCGACCTGGC GCGCATGGTG CCGCGCAGCG AATGGATCGA CCACCTGGGC
GCGCCGCCAC AGCCGCTGCG CATGGCCCTG CAGGTCGACG GCGGCCCGGC CTGGGCGCTG
CCGATGAACG ACGGCCAGCG TGTCGGCGAT CAGCAGGCCA CGGCGCAGGG CGGCTGGTCC
TTCGACTTCC GCAAGCACCT GGCCGCCGCC AGCCAGCCCT TCGAGCTGGT GGTGATGTGG
CAATCCGGCT GGGCCGCCTG GCCATGGGCG GCGCTGCTGA TCTGGACGCT CGCCAGCATC
GGCGCGGTGC TGGGCGGCTG GCGATTGCGC CGCAACTGGC TGGCGCAGGC CGAGCAGCGC
CGCCGCGCCG AGGAGCAATT GCGCTTCGGC CAGGTGGCGC GCCTGAATGC GCTGGGCGAA
CTGGCCGCCG GCATGGCGCA CGAGCTCAAC CAGCCGCTCA CCGCCGTGCT CGCCAGCACC
CAGACCGCCA CCCGCCTGCT CGCCGATGAC CCGCCCGAGC TCGGCACCGC CCAGCTGGCG
ATGCAGCGCG CCGTCGCCCA GGCCCGCCGC GCCAGCGAGG TGCTGCAGCG CCTGCGCCGC
GTCGTCCAGC CCAGCGGCCC GGGTGACGAC GCCGGCCCGC TGCGGCTGGC CGATGCGGTG
CGGCGCGCGC TCGACCTGCT GGCCGACGAA CTGGCGCGCC AGCAGGTCAC GCCGCAACTG
GCGCTGCCCG CCACGCTGCA GGTCGCGGCC GACCCGGTGG CGCTGGAGCA GATCCTGCAC
AACCTGCTCA GCAACGCCCT GCACGCGCTG GCCCAGGTGC CGGCACCGCA ACGCAGCCTG
GCGCTGCAGG CCACGCACAG CGGCGCGAGC GTCGAGCTGC GCATCACCGA CCATGGCCCC
GGCGTGCCCG CCGACCTGCA GCCGCACCTG TTCGAGCCCT TCGTCACCAC CCGCGACGGC
GGCCTGGGCC TCGGGCTCAG CCTGTGCGAA ACCCTCGCCG CCAGCATGGG CGCGCGCCTG
CACTTCGAGC CCGCCCAGCC GCGTGGCGCG GTGTTCGTGC TGAGCCTGCC CGCTGCCTCC
GACACGGACA CCGCCACCGA CCCCGTCCCG CCACAACCCC GATGA
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| Protein sequence | MLLLAVLLAS AGCAALLQRD QARQRDAFET QARIAHRLLS QQAVQHEAML ATLALLQGPG
GASDDAEQRL PAIFPSVLRV SRREPGQAWP TPPGNADPQA LSDAEQRSQR SGRAELVTPD
AAQFSAGRFV IVQASQSAAV AVQIDLARMV PRSEWIDHLG APPQPLRMAL QVDGGPAWAL
PMNDGQRVGD QQATAQGGWS FDFRKHLAAA SQPFELVVMW QSGWAAWPWA ALLIWTLASI
GAVLGGWRLR RNWLAQAEQR RRAEEQLRFG QVARLNALGE LAAGMAHELN QPLTAVLAST
QTATRLLADD PPELGTAQLA MQRAVAQARR ASEVLQRLRR VVQPSGPGDD AGPLRLADAV
RRALDLLADE LARQQVTPQL ALPATLQVAA DPVALEQILH NLLSNALHAL AQVPAPQRSL
ALQATHSGAS VELRITDHGP GVPADLQPHL FEPFVTTRDG GLGLGLSLCE TLAASMGARL
HFEPAQPRGA VFVLSLPAAS DTDTATDPVP PQPR
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