Gene Lcho_4278 details

Gene Information

• Locus tag: Lcho_4278
• ID: 6160625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4786796
• End bp: 4787323
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 641667055
• Product: putative phosphohistidine phosphatase, SixA
• Protein accession: YP_001793294
• Protein GI: 171060945
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2062] Phosphohistidine phosphatase SixA
• TIGRFAM ID: [TIGR00249] phosphohistidine phosphatase SixA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCGAGC CCCTGCCCAG CCCCCGCATC GTCCTGCTGC GCCACGCCAC CGCCCAGGAG 
CCGCGCCCCG ACCTGCCCGA CGCCCGTCGC GAGCTGGTCG CCAAGGGCGA ACGCCAGGCG 
CGCGACGTGG CGGCCTGGTG CCGGCGCCAG GGCCTGTGCC CGGGCCGGCT GCTGACCAGC 
CCGCTGCCGC GTGCCGCGCA GACCGCTGCG CTGCTGGCCG GCCACCTGGG CGACTGCCCG 
GCGCCCGAGC CGGCCGACTG GCTGCAGATC GGCACGCCCC CCGCCGTCAG CCTGGCGCGC 
GTGCAGGACC TGATGCACGC CCTGATGCGC CTGCCCGGCC CGCCCGAGCC CTGGCTGGTC 
GGCCACGAGC CCGACCTCAG CGGCCTGATC GCCGCCCTGC TGCACAGCCC GCGGCCGGTG 
CTGTGGCCGA AGAAGGCCTC GCTCACGGCC CTGGACTGGC CCGACGGCAT CGGCGCGCCG 
GCGCGGCTGC TGTGGCACCT GCCGTGTGCC TTGATGGGCG CCGCCTGA 

 

Protein sequence

MSEPLPSPRI VLLRHATAQE PRPDLPDARR ELVAKGERQA RDVAAWCRRQ GLCPGRLLTS 
PLPRAAQTAA LLAGHLGDCP APEPADWLQI GTPPAVSLAR VQDLMHALMR LPGPPEPWLV 
GHEPDLSGLI AALLHSPRPV LWPKKASLTA LDWPDGIGAP ARLLWHLPCA LMGAA