Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4260 |
Symbol | |
ID | 6163328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4768472 |
End bp | 4769455 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641667037 |
Product | aldo/keto reductase |
Protein accession | YP_001793276 |
Protein GI | 171060927 |
COG category | [C] Energy production and conversion |
COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC GCCAGCTCGG CAGCAGCCAC CTCGAAGTCT CCGCACTCGG GCTCGGGTGC ATGGGTTATG GCGAGGCGGC CGACAGGCAG GAAATGATCC GGCTGATCCG CGCGGCCGTC GAACGTGGCA TCACGTTCTT CGACACGGCC GAGTCCTACG GCCCGTTCAC GAATGAAGAA GTGGTCGGCG AGGCGTTGGC GCCGTTGCGT GGCGAGGTGG TGATCGCCAC CAAGTTCGGG TGGGACATCG ACCCCGAGAC CGGCGTCTTC CACGGGGGCG TCAACAGCCG TCCGCAGCAG ATCAGGCGTG CGGTCGACGG CATGCTCAGG CGGCTGCAGG TCGACTGCAT CGACCTGCTC TACCAGCACC GGGTCGATCC CGACGTGCCG ATGGAAGACG TGGCGGGCGC GGTGCAGGCC TTGATTCAGG ACGGCAAGGT CAAGCACTTC GGTCTGTCCG AAGCGGGTGC GGAATCGATC CGCCGCGCCC ACGCCGTGCA GCCCGTCACC GCCCTTCAGA GCGAATACTC GCTGTGGACC CGGGAACCCG AGGCGGACGT GATGCCCGTG CTCGAAGAAC TCGGCATCGG CTTCGTGCCC TTCAGCCCGC TGGGCAAGGG CTTCCTGACC GGCCAGATCG ACCAGGCGAC CCGCTTCGAC GCGTCCGACT TCCGCAACCG CGTGCCCCGC TTCGCGCTGC AGGCGCGCCA GGCCAATCAG GCGCTGGTCG ACGGGCTCGG CGCCATCGCC GGGCGCAGGG GCGTGACGCG CGCGCAGATC GCGCTGGCCT GGCTGCTGGC GCAAAAGCCG TGGATCGTTC CCATCCCGGG CACCCGCAAG ATCGAGCGGC TGGATGAAAA CATCGGTGCC GCCTCGGTCG AACTGAGTGC CGACGACCTG CAGGAGATCG CGGCGCTCGC GTCGGCCATC CCGGTGCAGG GCGAACGCTA TCCCGAGGAC TTCATGAAAC TTTCCGGCCG CTGA
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Protein sequence | MKKRQLGSSH LEVSALGLGC MGYGEAADRQ EMIRLIRAAV ERGITFFDTA ESYGPFTNEE VVGEALAPLR GEVVIATKFG WDIDPETGVF HGGVNSRPQQ IRRAVDGMLR RLQVDCIDLL YQHRVDPDVP MEDVAGAVQA LIQDGKVKHF GLSEAGAESI RRAHAVQPVT ALQSEYSLWT REPEADVMPV LEELGIGFVP FSPLGKGFLT GQIDQATRFD ASDFRNRVPR FALQARQANQ ALVDGLGAIA GRRGVTRAQI ALAWLLAQKP WIVPIPGTRK IERLDENIGA ASVELSADDL QEIAALASAI PVQGERYPED FMKLSGR
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