Gene Lcho_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4260 
Symbol 
ID6163328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4768472 
End bp4769455 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID641667037 
Productaldo/keto reductase 
Protein accessionYP_001793276 
Protein GI171060927 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GCCAGCTCGG CAGCAGCCAC CTCGAAGTCT CCGCACTCGG GCTCGGGTGC 
ATGGGTTATG GCGAGGCGGC CGACAGGCAG GAAATGATCC GGCTGATCCG CGCGGCCGTC
GAACGTGGCA TCACGTTCTT CGACACGGCC GAGTCCTACG GCCCGTTCAC GAATGAAGAA
GTGGTCGGCG AGGCGTTGGC GCCGTTGCGT GGCGAGGTGG TGATCGCCAC CAAGTTCGGG
TGGGACATCG ACCCCGAGAC CGGCGTCTTC CACGGGGGCG TCAACAGCCG TCCGCAGCAG
ATCAGGCGTG CGGTCGACGG CATGCTCAGG CGGCTGCAGG TCGACTGCAT CGACCTGCTC
TACCAGCACC GGGTCGATCC CGACGTGCCG ATGGAAGACG TGGCGGGCGC GGTGCAGGCC
TTGATTCAGG ACGGCAAGGT CAAGCACTTC GGTCTGTCCG AAGCGGGTGC GGAATCGATC
CGCCGCGCCC ACGCCGTGCA GCCCGTCACC GCCCTTCAGA GCGAATACTC GCTGTGGACC
CGGGAACCCG AGGCGGACGT GATGCCCGTG CTCGAAGAAC TCGGCATCGG CTTCGTGCCC
TTCAGCCCGC TGGGCAAGGG CTTCCTGACC GGCCAGATCG ACCAGGCGAC CCGCTTCGAC
GCGTCCGACT TCCGCAACCG CGTGCCCCGC TTCGCGCTGC AGGCGCGCCA GGCCAATCAG
GCGCTGGTCG ACGGGCTCGG CGCCATCGCC GGGCGCAGGG GCGTGACGCG CGCGCAGATC
GCGCTGGCCT GGCTGCTGGC GCAAAAGCCG TGGATCGTTC CCATCCCGGG CACCCGCAAG
ATCGAGCGGC TGGATGAAAA CATCGGTGCC GCCTCGGTCG AACTGAGTGC CGACGACCTG
CAGGAGATCG CGGCGCTCGC GTCGGCCATC CCGGTGCAGG GCGAACGCTA TCCCGAGGAC
TTCATGAAAC TTTCCGGCCG CTGA
 
Protein sequence
MKKRQLGSSH LEVSALGLGC MGYGEAADRQ EMIRLIRAAV ERGITFFDTA ESYGPFTNEE 
VVGEALAPLR GEVVIATKFG WDIDPETGVF HGGVNSRPQQ IRRAVDGMLR RLQVDCIDLL
YQHRVDPDVP MEDVAGAVQA LIQDGKVKHF GLSEAGAESI RRAHAVQPVT ALQSEYSLWT
REPEADVMPV LEELGIGFVP FSPLGKGFLT GQIDQATRFD ASDFRNRVPR FALQARQANQ
ALVDGLGAIA GRRGVTRAQI ALAWLLAQKP WIVPIPGTRK IERLDENIGA ASVELSADDL
QEIAALASAI PVQGERYPED FMKLSGR