| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4258 |
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| Symbol | |
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| ID | 6163326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4767652 |
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| End bp | 4768050 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641667035 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001793274 |
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| Protein GI | 171060925 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5611] Predicted nucleic-acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGTC TCGACACCAA CGTGCTGGTG CGCTGGCTGG TCGATGACGA TCCGGCGCAA
TCGGAAACAG TTCGGCGGTT GATGGAACAG GCAGTGGCTC GTGAGGAGCC CTTGTTCATG
TCCTCGACCG TCCTGCTCGA ACTTGAATGG GTGCTGCGCA CCAGCTACGG GTGCAGCAAG
CCGGACGTGT TGCAGATGTT CAATGCACTG CTCGAATCAC GCGAACTGGT GTTCGAGAAC
GAGGCCGCCG TGGAACGTGC GCTGAACCTG TATCGCGTCG GCAATGCAGA TTTCGGCGAG
TGTCTGCATG TCGGCATCGC AGGTGCTGCG TTGCAGGGGC CGATGTGGAC GTTTGATCGC
AAGGCGGCCC GACTGTCCGG AGCCCAATTG CTGACTTGA
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| Protein sequence | MASLDTNVLV RWLVDDDPAQ SETVRRLMEQ AVAREEPLFM SSTVLLELEW VLRTSYGCSK
PDVLQMFNAL LESRELVFEN EAAVERALNL YRVGNADFGE CLHVGIAGAA LQGPMWTFDR
KAARLSGAQL LT
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