| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4250 |
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| Symbol | |
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| ID | 6161027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4760158 |
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| End bp | 4761189 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641667027 |
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| Product | isocitrate dehydrogenase (NAD(+)) |
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| Protein accession | YP_001793266 |
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| Protein GI | 171060917 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CCATCCCCGC CACCCTCATT CCCGGCGACG GCATCGGGCC CGAGATCGTC
GAAGCCACGC TGGCTGCGCT CGACGCGCTC GGCGCACCGT TCGAATGGGA CCGCCAGATC
GCCGGCCTCG AAGGCGTGAC CACCGCCGGC GACCCGCTGC CGCAGGCCAC GCTCGACAGC
ATCCGCCGCA CCCGGCTGGC GCTCAAGGGC CCGCTGGAGA CCCCGTCGGG CGGCGGCTAC
CGCAGCTCGA ACGTGCGCCT GCGCGAGGAG TTCAAGCTCT ACGCCAACCT GCGCCCGGCG
CTGACCATCG TGCCCGGCGG TCGCTACGAC AAGATCGACC TGGTGGTGGT GCGCGAGAAC
CTCGAGGGCC TCTACATCGG CCACGAGCAT TTCGTGCAGA TCGACGACGA CCCGCACGCC
GTGGCGATGG CCACCGGCAT CAACACCCGC GCGGGCTGCC GGCACATCCT CGAATACGCC
TTCGAACACG CCATCGCGAC CGGCCGCAAG AAGGTCACGA TCGTGCACAA GGCCAACATC
ATGAAGGCGC TGACGGGCAT CTTCAAGGAA ACGGCCGAGC AGATGTACGA GGCGAAATAC
AAGGACAGGA TCGCGATGGA CACCATCATC GTCGACGCCT GCGCGATGAA GCTGGTGCTC
AACCCGTGGC AGTTCGACGT GCTGGTGACG ACCAACCTGT TCGGCGACAT CCTGTCCGAC
CTGGTGGCCG GGCTGGTGGG CGGACTCGGC ATGGCGCCGG GCGCCAACAT CGGCGCCGAC
GCGGCGATCT TCGAGGCCGT GCACGGCTCG GCGCCCGACA TCGCCGGCCA GAACAAGGCC
AACCCGACCG CGCTGCTGCT GGCCGCGGCG ATGATGCTCG ACCATGTCAA GCTGACCGAC
ATGGCCACCC GGCTGCGCCA GGCGATCGAC GCCACCTTGA ACATCGATCT GGTGCGCACC
GGCGACCTCG GTGGCAGCGC CAGCACGACC GTGTTCACGC AGGCACTGGT CAACCGCATC
CGGAACGGCT GA
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| Protein sequence | MSQTIPATLI PGDGIGPEIV EATLAALDAL GAPFEWDRQI AGLEGVTTAG DPLPQATLDS
IRRTRLALKG PLETPSGGGY RSSNVRLREE FKLYANLRPA LTIVPGGRYD KIDLVVVREN
LEGLYIGHEH FVQIDDDPHA VAMATGINTR AGCRHILEYA FEHAIATGRK KVTIVHKANI
MKALTGIFKE TAEQMYEAKY KDRIAMDTII VDACAMKLVL NPWQFDVLVT TNLFGDILSD
LVAGLVGGLG MAPGANIGAD AAIFEAVHGS APDIAGQNKA NPTALLLAAA MMLDHVKLTD
MATRLRQAID ATLNIDLVRT GDLGGSASTT VFTQALVNRI RNG
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