| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4248 |
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| Symbol | |
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| ID | 6161025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4758202 |
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| End bp | 4759860 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641667025 |
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| Product | hypothetical protein |
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| Protein accession | YP_001793264 |
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| Protein GI | 171060915 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4929] Uncharacterized membrane-anchored protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATG CCCGGCTCGA CGCGATCACG CGCGCCGCAG TGGCCGAAGG CCTGCTGCCC
GATACCGCCC TGCAGCCCGG CGAGCCGGCG CGGCCCTGGC CGGTGGTGCT GATGTCGGCG
CTGGGCGCCT GGCTGGTCGG CCTGCCGATG TTCGGGCTGA TCACGCAGCT GTTCCTCGGC
GTGTTCGACA GCAACCTCGG CGCCTACCTG ATCGGTGCGC TGGTGCTGGC GGCGGCCGTG
GCGGCCTTGC GCAAGCCGGG CCACACGCTG TTCGTCGAAC AGCTGGCGGT GGCCGGTCTG
GTGGCCGGTG CCGGTTATCT GGCGATCGGC CTGACGCGCC AGCTGCCGAC CTCGGCCGCC
GCGGCCCTGC TCGCCACGCT GGCGCTGTGG CTGGCCGTGC TGCTGCGCCA GAACTGGCTG
CGCATGCTGC TGGGCGCCGC CGCCTGCGCC GGTGTGCTGA TCGCCGGGCT CGACCTGATC
CTGCCGCGCG GCGGGCCGGC GTCCCTGCCG CGGGTGGCGC TGCTGCTGCA CCTGCTGCTC
GCCGTCTGGC TGCTGGCGCC GCGGGTGGTG GACGCCCTCG TGGCGCAGCG CAGCGCGCCG
CCCGGTGCGC TGCCACGTTC GCTGGCCTGG CTGGAGGCGG TCGGCACCGG CTGGCTGGCG
GTCACGCTGC CGGCGCTGGC CGTGCTGGCC GGGTTCGACG GGTGGGCGCG CAGCGGCCCG
GACCGCGCGG TGCAGGGCTT CGGCTGGGCC GACCTGATGC CGCTGCTGTC GGTGCTTGCG
GCGCTGGCGG CCGCCGTCGT CGGATGGCGC CGCTGGCCGC CGCTGCGCGC GCCGTGGTGG
CTCGGCGTGG CCGCCACCCT GGCACTGCTG GCGTGGTTCA TGCCGACGCT GGGCGCGGTG
CTGCTGGCGC TGGCGGTCTG TGCCGTCACC CGGCGCTCGT GGCTGGCCGC CCTGGCGCTG
CTGACGGGGC TGTGGATCGG CTCGGCGTTC TATGACCAGC TGACCTGGAC GCTGGCCCAG
AAAGCCGCCC TGCTGGCCGT CAGCGGCCTC TGGCTGGGCT TGCTGGCCGC CTGGGGCCAG
CGCAGCAGCG TGCCGGCCGA CCCCGCCGCC GCACCGTCTG CGGCGGCCGA TCCGTCACCG
AGCCGCTGGG CCCGCGCCGG CTCGATCGCC TGCGTGCTGG CGACGCTGGC GGTGGCCAAC
ACCGGCATCT GGCGCAACGA GGCGCTGATC CGCGATGGCC AGCCGGTGTT CGTCGAGCTG
GCGCCGGTCG ATCCGCGTTC ACTGATGCAG GGCGACTACA TGGCGCTCGA CTACCGGATG
GATGCCGCCC TGCTGCACCA GCTGGCGCAG CAGTCACGCC TGGATCGGCA GCGGGTGGTG
GCGCGCATCG ATGCACGCGG CGTTGCCGAA CCGCTGCGGC TGGCCGATGA AAAACCGCTC
GCAGCCGACG AGCGCCTGAT CGAGCTGGCG CCCAGGAACG GCCGCTGGGT GCTGGTCAGC
GACGCCTGGT TCTTCCGCGA GGGCCAGGGC GCCGTCTGGC AGGCGGCGCG CTACGGCGAG
TTCAGGCTGG CGGGGGACGG TCGCGCGCTG CTGGTCGGCC TGGCCGATGA CGGCCTGCAG
CCGATCCGGC CACCCGTCGA GACGGCCACC GCGCGCTGA
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| Protein sequence | MSDARLDAIT RAAVAEGLLP DTALQPGEPA RPWPVVLMSA LGAWLVGLPM FGLITQLFLG
VFDSNLGAYL IGALVLAAAV AALRKPGHTL FVEQLAVAGL VAGAGYLAIG LTRQLPTSAA
AALLATLALW LAVLLRQNWL RMLLGAAACA GVLIAGLDLI LPRGGPASLP RVALLLHLLL
AVWLLAPRVV DALVAQRSAP PGALPRSLAW LEAVGTGWLA VTLPALAVLA GFDGWARSGP
DRAVQGFGWA DLMPLLSVLA ALAAAVVGWR RWPPLRAPWW LGVAATLALL AWFMPTLGAV
LLALAVCAVT RRSWLAALAL LTGLWIGSAF YDQLTWTLAQ KAALLAVSGL WLGLLAAWGQ
RSSVPADPAA APSAAADPSP SRWARAGSIA CVLATLAVAN TGIWRNEALI RDGQPVFVEL
APVDPRSLMQ GDYMALDYRM DAALLHQLAQ QSRLDRQRVV ARIDARGVAE PLRLADEKPL
AADERLIELA PRNGRWVLVS DAWFFREGQG AVWQAARYGE FRLAGDGRAL LVGLADDGLQ
PIRPPVETAT AR
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