| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4231 |
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| Symbol | |
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| ID | 6160898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4742204 |
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| End bp | 4743538 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641667008 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001793247 |
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| Protein GI | 171060898 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.138505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC TCAGCGAAGC GGTGCAGCCC GAGCGCATCG GCAAATACCG CGTCATACGC
CGACTCGGCG AAGGCACCAC CAGCGAGGTC TTCCTCTGCC ACGACGAATT CCATGACCGC
CAGGTGGCGG TCAAGCGGGT GCGCGCCAGC GCGCTGCGCG ATGCCGTCGA CGGCCACGTG
TTCTCGCGCT TCTTCGCCTC CGAGGCGGCG CTGGCCGGGC TGCTGCACCA CCCCAACGTG
GTCGACATCT TCGACGCCGT GCCCGACCCG GTCTCGCCCT ACGTGGTGAT GGAGTACGTG
CCCGGCACGA CGCTGCGTGC CTACTGCCAG AGCGGCCACC TGCTGCCGCT CGAGCAGGTG
GTCGAGATCG GCTTCAAGTG CGCGATGGCG CTCGGCTACT GCTACCGCCA GGGCCTGATC
CACCGCGACG TCAAGCCGGC CAACATCCTG GCGCTCGAAA CCAACGGCGT CGTCACCGAC
GTCAAGATCA CCGACTTCGG CAGCGCGCTG AACCTGGCGT CCGACGCGAC CCAGGTGCAC
CGCGTCGGCT CGCTGGCCTA CATGTCACCC GAGCAGCTCG ACGGCAGCCA GCTCGATGCG
CGCTCCGACA TCTACTCGCT CGGCGCCGTG CTCTACCACC TGATCGCTGG CCACGCCCCG
TTCGAGGCCA GCAGCCAGGC CAGCCTGATG CACCAGATCT GCCACGTGCA GCCGGTGTCG
CTGGTGGGCC TGCGTGCCGG TGTCAGCACC GCGCTGGATC AGGTCGTGCA GCGCTGCCTG
TCCAAGCGCG CCGACCTGCG GTTCTCGTCG TGGGACGCGC TCGGCGAGGC GCTCTCGCAG
CTCATCACGA TGCACCACGT GCCGCGTGGC GCGCTGCAGG GCGTGCTCGA CTCGGAGCGT
TTCACGCTGC TGCGCACGCT CGACTTCTTC AACAACTTCG GCGACGTCGC GCTGTGGGAG
GTCGTGCACC GCGCCAAGTG GCAGCGCTTC GCGGTCGGCC ACGCGCTCTA CAGCAAGGGC
GAGGAAGGCC GGCACTTCCA CATCATCGCC AGCGGCGCGG TCGAGGTCTA CCGCGACGGC
CGACGGGTCG CCGAACTCGG CACCGGCACC TCGGTGGGCG AGATGGCCTA CCTCGCGCCC
AACCCCGAGC TGCGCCGCCA CAGCACCGAC ATCGTCGTCA CCGACGCGGC CACCACGATC
TCGTTCGCGC CCGATTCGCT GGCACGCCTG AGCCCGGCCT GCCGGCACCT GTTCGACGAG
GCCTTCATCC GCGTGCTGGT GCGCCGACTG CACGCCGCGC ACGAAGCGCT CGCCCACCCG
CGCCGCATCC TCTGA
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| Protein sequence | MIDLSEAVQP ERIGKYRVIR RLGEGTTSEV FLCHDEFHDR QVAVKRVRAS ALRDAVDGHV
FSRFFASEAA LAGLLHHPNV VDIFDAVPDP VSPYVVMEYV PGTTLRAYCQ SGHLLPLEQV
VEIGFKCAMA LGYCYRQGLI HRDVKPANIL ALETNGVVTD VKITDFGSAL NLASDATQVH
RVGSLAYMSP EQLDGSQLDA RSDIYSLGAV LYHLIAGHAP FEASSQASLM HQICHVQPVS
LVGLRAGVST ALDQVVQRCL SKRADLRFSS WDALGEALSQ LITMHHVPRG ALQGVLDSER
FTLLRTLDFF NNFGDVALWE VVHRAKWQRF AVGHALYSKG EEGRHFHIIA SGAVEVYRDG
RRVAELGTGT SVGEMAYLAP NPELRRHSTD IVVTDAATTI SFAPDSLARL SPACRHLFDE
AFIRVLVRRL HAAHEALAHP RRIL
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