Gene Lcho_4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4189 
Symbol 
ID6160810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4695137 
End bp4695559 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content69% 
IMG OID641666966 
Producthypothetical protein 
Protein accessionYP_001793205 
Protein GI171060856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.219092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATTT TCAGCAACAT CCTTTCCAAG CTCGGTTTCG GCGACGACGC CCAGAAAGCG 
GCGGAGACGG CGGCAACGAC CGTCACCACA ACCGCCGCCG CCACGCCGGC AGCGGCCGCA
CCCGAGGCGG CACCAGCGCC GGCCGCGCCG GTGGCGATCA GCCCCGTCGA CGTGGTCGCC
AAGCTCGAAG CCCTGGCGGG CGCCCACGCC GAGAAGCTCA ACTGGAAGGT CTCGATCGTC
GACCTGCTCA AGCTGCTCGG CCTCGACACC AGCCTGGCCG AGCGCAAGGC CCTGGCCACC
GAGCTGGGCT GCCCGGCCGA GAAGATGGGC GACTCGGCGC AGATGAACAT GTGGCTGCAC
AAGGCCGTGC TGCAGAAGCT GGCCGACAAC GGCGGCAACG TGCCGGCGGA GTTGCTGGAC
TGA
 
Protein sequence
MGIFSNILSK LGFGDDAQKA AETAATTVTT TAAATPAAAA PEAAPAPAAP VAISPVDVVA 
KLEALAGAHA EKLNWKVSIV DLLKLLGLDT SLAERKALAT ELGCPAEKMG DSAQMNMWLH
KAVLQKLADN GGNVPAELLD