| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4170 |
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| Symbol | |
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| ID | 6162398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4674642 |
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| End bp | 4676357 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641666947 |
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| Product | hypothetical protein |
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| Protein accession | YP_001793186 |
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| Protein GI | 171060837 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTG TAGCGAGGCC ACTGGAAATT CAGCAGTTGG AAGCATACCT CAAGCGTGAA
TTTGATGGGG GCATCATCGG GACTGGCAAC AAGGCCCTGG ACAAGGAGCG GAACTTTTTA
TCCAAGGCCG TCGCGGCTAG CTTTTTGATG GTCCATGCAG GCGTCAGTAA GGCCGATGCA
ATAGCGGCCT GTGTAGACGG GGGCGGCGAC AATGGAATTG ATTCGCTCTA CATCAGCCCC
ACCAACGTGA TATGGCTGGT GCAATCGAAA TACATCCATG AAGGCTCTGG TGAACCTTCT
CTGGGAGATG CTGGCCTGTT CCGCGATGGT GTAAACGCTA TCGTGGATGG ACAGTTTGAC
CAATGCAAGA CCTTGTCTGC CACTCAGATT GCTCAGCTGA TTCGGGTTAT GGATGAATCG
CACCAAGTGG TTTTTGCACT GGTTTACACC GGTACTGCGA TGGACGACAG TCGGCGAAAA
ATGTTCGGCG AGGTGGTCGA TCGAGTGAAT GCCATCGCAC CGCGCAGGGC GCGGTTTGTG
CGGTTCGGCT TGTCCGACTT CCATGAGGCA CTCACTCAGC AGTTTGCCGA GCCAGACATC
AACGGTGTGC AGATCGAATT GCGTGACTAC GGTGTGATGA ATGGTGTTGC TCGTGCTTAT
TACGGCAGCA TGAGTGTCAA AGATCTGGCC GCCCTGTATG TCCAGCATGG GCACGCCTTG
GTGCGCGCCA ACATTCGCCG ACACCGCGGT TCGTCCGAGG TCAACGAAAG CATGGCGTTG
ACTTTGAAGA ACGATGCTTC AAAGTTCTTT TACTTCAATA ACGGCATCAC GTTAATTTGC
CGAAGCATTA GGCCCGGCCA ATTGGATCGA ACGCGAGCGG CAGGCAAATT CCATCTAGAT
GGCGTGTCGA TCATCAATGG GGCTCAGACT GCAGGCACCG TGGCGCAGGA GCCCCCAGCG
CACTACGAGG CTCATCCTGC TGAAGTTCTG GTGACCTGCA TCGAGTTGCC GGCGGACGAT
CAAGGTTTTG CCGATGACGT GACCCGCTTC CGCAACAGCC AGAACGCGGT CAGCCCACAA
GATTTTGCTG CTCTGGATGA CAACCAGGAG TCTTGGCGAA AAACGCTGCA GTCAGAGGGC
GTTACCTACA TCGTCAAGCG CAGCACCAGC GATGGTCCGG CGGATATCAA CTCGTTCACG
CTGCAAGAAG CGGCTGAAGC CCGGGCGCTT TTAGGCAGTG CTGGGCTGGA ATTGCTTCTG
GAGCATCCCG TGCGCTTGTG GGATCGTGGC CATGACGTTA AGGGTGACAA GGCTACCGCT
GACAAACCTT CTGCCTACAA GACCGTTTTT CCTGATTCGC TCACGGCTCG CAAGCTTTGG
CGCACGGTGC AGATTGCCCG GATCGTTCAA CAGACTATCG AGCAAGACGC AATGGCGATG
ACCAGTCCCC TGGAGTCCGA CTTCGCGCGG CAATCGGCGC GCTTGATGGC CCATGTCATC
TTGATTCGCT GCAAGTCGCT CACGGACGGT GAGACCTTGG CGCTGACGAC AAATGAGCAA
CTCACAGTTT CTAGCACTCT GGATACTGCA CGAAACGCGC TTGTACAAGC CTATTCCGAG
ATTGAGACGA CACAGCGGCC GTTCGCCGAA GCTTTTGCGG ACCTCAGCAC TCTTTGTGCC
TTGAAAGCCT TAGTGATGCA GGCATTGCAC GCTTGA
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| Protein sequence | MATVARPLEI QQLEAYLKRE FDGGIIGTGN KALDKERNFL SKAVAASFLM VHAGVSKADA
IAACVDGGGD NGIDSLYISP TNVIWLVQSK YIHEGSGEPS LGDAGLFRDG VNAIVDGQFD
QCKTLSATQI AQLIRVMDES HQVVFALVYT GTAMDDSRRK MFGEVVDRVN AIAPRRARFV
RFGLSDFHEA LTQQFAEPDI NGVQIELRDY GVMNGVARAY YGSMSVKDLA ALYVQHGHAL
VRANIRRHRG SSEVNESMAL TLKNDASKFF YFNNGITLIC RSIRPGQLDR TRAAGKFHLD
GVSIINGAQT AGTVAQEPPA HYEAHPAEVL VTCIELPADD QGFADDVTRF RNSQNAVSPQ
DFAALDDNQE SWRKTLQSEG VTYIVKRSTS DGPADINSFT LQEAAEARAL LGSAGLELLL
EHPVRLWDRG HDVKGDKATA DKPSAYKTVF PDSLTARKLW RTVQIARIVQ QTIEQDAMAM
TSPLESDFAR QSARLMAHVI LIRCKSLTDG ETLALTTNEQ LTVSSTLDTA RNALVQAYSE
IETTQRPFAE AFADLSTLCA LKALVMQALH A
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