| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4157 |
|---|
| Symbol | |
|---|
| ID | 6161160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 4660877 |
|---|
| End bp | 4661383 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641666934 |
|---|
| Product | putative universal stress protein UspA |
|---|
| Protein accession | YP_001793173 |
|---|
| Protein GI | 171060824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGC TCCTCCTGCC CTGCGACGGA ACACCCAACG CCCTGCTGGC CGTGCGACAC
GCGTGCGATG CGTTCCGCCG CGGCGACGTG CGCATGGTTC ACCTGCTCAA CGTGCAGGCG
CCGTTCTCGT CCTACGTGGC CCGCCACGTC GATCGGGAGC TGCGCGCCGA CTACCACCGC
GAACAGGCCG AAGAAGCGCT GGCCGAGGCC CGACGGCTGC TCGATGCCGC CGGCGTCCCC
TGCCGCGCGC ACAGCGAGGT CGGCGACAAG GCCCAGTGCA TCGCCGACGC CGCGCTGCGG
CTGCGCTGCA ACCGCATCGT CGTCGCCACG GCGCGCAAGA GCGCGCTGGT GCGCGCGGTC
GAGAACTCGC TCACCAGCCA GTTGCTCGAG CTCTGCCCGG TGCCGGTCGA GGTGATCGGC
GGCGCCCCGG CCGGTGCGCT GGAGCGGGTC GGCATCCCCG CCGGCGTGGG GGCCGGCGCG
GCCTTGCTGC TGTTGAGCGC GTCGTGA
|
|---|
| Protein sequence | MDTLLLPCDG TPNALLAVRH ACDAFRRGDV RMVHLLNVQA PFSSYVARHV DRELRADYHR
EQAEEALAEA RRLLDAAGVP CRAHSEVGDK AQCIADAALR LRCNRIVVAT ARKSALVRAV
ENSLTSQLLE LCPVPVEVIG GAPAGALERV GIPAGVGAGA ALLLLSAS
|
|---|
| |