| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4139 |
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| Symbol | |
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| ID | 6163800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4646332 |
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| End bp | 4647261 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666917 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001793156 |
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| Protein GI | 171060807 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCG TCGTCACCGC ACCGGCCACG TTTTCCAGTG CCTTGCAGGA TCTGCCGTTC
GCCGCCGGCG CTGCCGGCCA GCCGCATCAC CAGCCCGAGC TGCGGCCGCC ACCCGGCGGT
TTCGTGCCGC GGGTGGTGGG CTATCGCGAC CAGACCGCGC TCGCCGGCAC CGAGGCCGGC
CCGACGCTGA CGGTGCAGAT GCTCGATGGT TTCCAGGTCT GGATCGGCGC CGATCCGGTC
ACCGGGCTGC CGCAGGGCAA GCCGCGGTCG CTGCTCAAGC TGCTGCTGCT GCAACGCCGC
CGGCCCTTGT CGCGGGCGCG GCTGTGCGCG CTGTTCTGGC CCGATGCCGA CGCGGCCAGC
GCACGCAACA GCCTCAACGT CACGCTGCAC CGCCTGCGCC GCGCGCTCGG CCACGCCAGC
CTGGTGCGCC ACGGCGACGC CGGTTATCAG CTGGTGGCCG CGGGCGATGT CTGGCTCGAC
ACCGAGCAGT TCCTGCTGCA CGCCGAGATG GGCCAGCTCG AGGACGCCCA GGGCCGCAGC
GCCGGCGCCA TCCACCAGTA CGAGGCGGCG CTGGCGATCT ACCGCAGCGA CCTGCTCGAC
GAGGGCGATT CGGACCGCGC GCTCGCCGCC CAGGCGCAGG CGCTGCGCGA CCGGCTCAAC
CAGACGCTCG AACGCCTGGC CGTGCTGCGC GAGCAGGCCG CCGACTGGCA CGGCTGCCTG
CGCGCCGCGC TGCGCCATCT GGGCCTGGAC GAATGCAACG AGGCCGCGCA CCGCCGCCTA
ATGCGCTGCT ATGCACGGCT CGGCCAGCCG CAGCTGGCCG AGCGCCAGTA CCGCGCCTGC
GTCACGGTGC TGCGGCTGCA GCTGGGCCTG AGCCCGAGCG ACGACACCAC CGCGCTCTAC
CGCCGCATCG CCGCCCGCAC GGGCGATTGA
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| Protein sequence | MHTVVTAPAT FSSALQDLPF AAGAAGQPHH QPELRPPPGG FVPRVVGYRD QTALAGTEAG
PTLTVQMLDG FQVWIGADPV TGLPQGKPRS LLKLLLLQRR RPLSRARLCA LFWPDADAAS
ARNSLNVTLH RLRRALGHAS LVRHGDAGYQ LVAAGDVWLD TEQFLLHAEM GQLEDAQGRS
AGAIHQYEAA LAIYRSDLLD EGDSDRALAA QAQALRDRLN QTLERLAVLR EQAADWHGCL
RAALRHLGLD ECNEAAHRRL MRCYARLGQP QLAERQYRAC VTVLRLQLGL SPSDDTTALY
RRIAARTGD
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