| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4111 |
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| Symbol | |
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| ID | 6160662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4616077 |
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| End bp | 4617450 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666889 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_001793128 |
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| Protein GI | 171060779 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00174972 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTTGC CCACCACCCT CACCGCCCTT TCTCCCCTCG ACGGCCGCTA CGCCGCCAAG
CTCGCGGCGC TGCGCCCGCT GCTGAGCGAG TACGGCCTGA TGCACCGCCG CGTGCAGGTC
GAGGTGGAGT GGTTCATCGC CTTGTCGGAC GCCGGTTTCG ACGAGTTCAA GCCGCTGTCC
GAAGCCGGCC GCGGCCTGCT GCGCTCGCTG GTGCTGCGCT TCAGCGAAGC CGATGCGCAG
GCCATCAAGG ACATCGAGCG CACCACCAAC CACGACGTCA AGGCGGTCGA GTACTGGCTG
AAGTCGCGTT TTGCCGAGCA GGCCGAGCTG AAGGCGGCCG GCGAGTTCGT GCACTTCGCC
TGCACCAGCG AGGACATCAA CAACACCAGC CACGCGCTGA TGCTCAAAGC CGCGCGCGAA
GAGGTGCTGC TGCCCACGAT CGACCGCATC ACCGCCAAGC TCGGCACCCT GGCGCGCGAT
TTCGCCGCCG TGCCGATGTT GAGCCGCACC CACGGCCAGA CCGCCAGCCC GACCACCGTC
GGCAAGGAAC TCGCCAACGT GGTGGCGCGC CTGGTGCACG CCCGCGAACG CGTGGCCGCC
GTCAAGCTGC TGGCCAAGAT GAACGGCGCG GTCGGCAACT ACAACGCCCA CCTGTCGGCC
TACCCGTCGC ACGACTGGGA AGGCTTCAGC CGCAACGTGG TCGAAGGCGC GCTGGGCCTG
ACGTTCAACC CGTACACGAT CCAGATCGAG CCGCACGACT ACATGGCCGA GCTGTTCGAC
GCGCTGACCC GCGTCAACAC GATCCTGATC GACTTTTCGC GCGACGTCTG GGGCTACATC
AGCCTGGGCT ACTTCAAGCA GCGCACGAAA GAAGGCGAAG TCGGCTCGTC GACCATGCCG
CACAAGGTCA ACCCGATCGA CTTCGAGAAC GCCGAGGGCA ACTTCGGGCT GTCGAGCGCG
CTGCTCACGC ACCTGAGCCA GAAGCTGCCG ATCAGCCGCT GGCAGCGTGA CCTGACCGAC
AGCACCGTGC TGCGCAACAT GGGCGTGGCC GTCGGCTACG CCCAGCTCGG CTACGACAGC
CTGCTGCGCG GCCTCGACAA GCTGCAGCTC AACGAAGCCG CGCTCGCCGC CGACCTCGAC
GACGCCTGGG AAGTGCTGGC CGAGCCGATC CAGACCGTGA TGCGCCGCTT CGGCCTGCCC
GAGCCCTACG AGCAGCTCAA GAAGTTCACC CGCGGCCAGC CGATGACCCG CGCGCTGATG
CAGGGCTTCA TCGCCGACCT CGACCTGCCG CAGTCCGAGA AGGACCGCCT GCTGGCGATG
ACGCCGGGCA GCTACACGGG GCTGGCGGCC GAGCTGGCGC GGCGCGTGGG CTGA
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| Protein sequence | MSLPTTLTAL SPLDGRYAAK LAALRPLLSE YGLMHRRVQV EVEWFIALSD AGFDEFKPLS
EAGRGLLRSL VLRFSEADAQ AIKDIERTTN HDVKAVEYWL KSRFAEQAEL KAAGEFVHFA
CTSEDINNTS HALMLKAARE EVLLPTIDRI TAKLGTLARD FAAVPMLSRT HGQTASPTTV
GKELANVVAR LVHARERVAA VKLLAKMNGA VGNYNAHLSA YPSHDWEGFS RNVVEGALGL
TFNPYTIQIE PHDYMAELFD ALTRVNTILI DFSRDVWGYI SLGYFKQRTK EGEVGSSTMP
HKVNPIDFEN AEGNFGLSSA LLTHLSQKLP ISRWQRDLTD STVLRNMGVA VGYAQLGYDS
LLRGLDKLQL NEAALAADLD DAWEVLAEPI QTVMRRFGLP EPYEQLKKFT RGQPMTRALM
QGFIADLDLP QSEKDRLLAM TPGSYTGLAA ELARRVG
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