| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4102 |
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| Symbol | |
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| ID | 6160060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4605921 |
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| End bp | 4607405 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666880 |
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| Product | peroxidase |
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| Protein accession | YP_001793119 |
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| Protein GI | 171060770 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2837] Predicted iron-dependent peroxidase |
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| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000720759 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACCGCC CGATCCACAC CCCGTCGCGC GTGCAGCGCC TGCCGGTGGC CGGCTACAAG
CGGGCCACGC ACGCCCGCCA CCTGCTGCTG GCGATCCGCT CGGCCGAGGC GGCGCGGGCG
CTGCTGCAGC AGTTGCACCA CGACGACCGG CAAGGCCTGC GCTTCGGCCC CGCCGATGGC
TGGCACGCCC CCGAAGCCAG CGGGCTCGAC ATCGGCTTCA GCCACGACGG CCTGCTGCGC
CTGGGCCTGC CGGCGCCGCA CACCGGCACG CTGGCGACCC GCGCACGCGC CTTCAAGCTC
GGTGCCTATC AGCGCGCCGC CCGGCTCGGC GACAGCGGCG ACAGCGCACC GCTGCGCTGG
GAGCGCGGTT TCGCGCCACG CGAGACCGAC CTGATGCTGT CGATGCACGC CGCCGACGCC
GCGACGATCG ACACGCGCTG GCGCCACCTG ACCGGCTTGC GCGGCTGGGC CGACGCCTTC
GAGCTGCGCA GCGAGCAGCC GGCAGCCCAT CTGCCGCAGA GCGCCCGCAA CCCGGGCCGC
CGCAGCGAAC ACTTCGGTTT TGCCGACGGC CTCGCCAACC CCGACCTGGG CCTGGCGCGA
CCGCGCGCAC TCGCGCCCGA CACGCCGGCC GACGCCGCCA CGCCGACGGC GCTGGGCGAG
CTGCTGCTGG GTCATCCGAA CCAGGTCGGC GCCAATCCCT GGTTCTTCGA TGACGACGCC
GGACTGCCGC AGCCACCGCA GCGGGGCCGG GCCCCCGACG AGTTCGAGCA GAAGCAGGCC
GAGCTGAGCG ACTTCTTCCG CGACGGCTGC TTCGGCGTGC TGCGCAAGAT GGCGCAGCAC
GTCGAGGTGT TCGAGGCCTG GGTCGACCAG GCGGCGCGAC GGCTGATGCA CGCGGCCGGG
CCGCTCGACC TCGATGCGGC GCGGCTCTAC ATCAAGGCCA AGCTCTGCGG GCGCTGGCCC
AACGGCCAGG TGCTGAGCGA GCGCGACGGC TATCGGCAGC CCGACGCCGA CGCCGAGGGC
CTGAACCGCT TCGACTTCAG CGACGACCCC CAGGGCCGCG CCTGCCCGTT CGGCTCGCAC
ATCCGGCGCA TGAACCCGCG CAGCGACGCG GTGGTGCCGG CCCGCACGCG TGCCCTGGTG
CGCCGCGGCA TGCCCTACGA ACAGGCCGGC GACGCCGACC GCCAGCGCGA GCGCGAACGC
GGCCTGATGG GGCTGTTCTT CTGCGCCAGC ATCGAGGACC AGTTCGAGCA CCTGCTCGGC
GAATGGACCA ACAAGAACCC GATGGGCCCG GACAACGCCG GCACCGCCAA GGACCCGCTG
ATCGGCCAGC ACGAAGACCC CGAGGCCTTC CTCGAGATCT GGCTGCCGGA CGGCCGGCCC
TTGCGGCTCG ACGGCCTGCC CCCGTTCGTG CAGACCCGCG GCACGCTGTA CCTGTTCTAC
CCGAGCGAGC GCGCCTACCT CGAGATCTGC GGGGCGCGGC CATGA
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| Protein sequence | MNRPIHTPSR VQRLPVAGYK RATHARHLLL AIRSAEAARA LLQQLHHDDR QGLRFGPADG
WHAPEASGLD IGFSHDGLLR LGLPAPHTGT LATRARAFKL GAYQRAARLG DSGDSAPLRW
ERGFAPRETD LMLSMHAADA ATIDTRWRHL TGLRGWADAF ELRSEQPAAH LPQSARNPGR
RSEHFGFADG LANPDLGLAR PRALAPDTPA DAATPTALGE LLLGHPNQVG ANPWFFDDDA
GLPQPPQRGR APDEFEQKQA ELSDFFRDGC FGVLRKMAQH VEVFEAWVDQ AARRLMHAAG
PLDLDAARLY IKAKLCGRWP NGQVLSERDG YRQPDADAEG LNRFDFSDDP QGRACPFGSH
IRRMNPRSDA VVPARTRALV RRGMPYEQAG DADRQRERER GLMGLFFCAS IEDQFEHLLG
EWTNKNPMGP DNAGTAKDPL IGQHEDPEAF LEIWLPDGRP LRLDGLPPFV QTRGTLYLFY
PSERAYLEIC GARP
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