| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4067 |
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| Symbol | |
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| ID | 6162153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4556834 |
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| End bp | 4557706 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666845 |
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| Product | sensor protein |
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| Protein accession | YP_001793084 |
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| Protein GI | 171060735 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2770] FOG: HAMP domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000038366 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTGC TCTGGAAGTT CAACCTGATC TTCGTGCTGG TGTTCGCCGC CGGCCTGGGC
GTGAGTGCCT ACGTGCTGCG CAACCTGCTG CAGCAGCAGG CCCAGGACGA GGTCATCGAC
CGCGCCCGCC TGCTGATGGA AAAGGCCATC GCGGTGCGCA GCTACACCTC CACCCACATC
CGCCCGCTGC TCGACACGCA GATGAAATAC AGCTTCCTGC CCGAGTCGGT GCCGGCCTTT
GCCGCCACCG AGGTGATCGC CGCGCTGCAC AAGACCTATC CCGACTACAG CTACAAGGAA
GCCACGCTCA ACCCCACCAA CCCGCGGGAC CGGGCGGTCG ACTGGGAGGT CGACGTGGTC
AACCAGTTCC GCAACCGCGC CGAGCTGAAG GAATACATCG GCCAGCGCCA GCCCGACACC
GGCCGCGCGC TCTACATCGC CCGGCCGATC CGCATCACCG ACGCCGCCTG CCTGCGCTGC
CACAGCACGG TCGACGCCGC GCCGCGGCCG ATGATCGAGC GCTACGGCCC GGCCAACGGC
TTCGGCTGGA ACTTCAACGA GGTGGTCGGC GCGCAGATCG TGTCGGTGCC GATGGCGCTG
CCGCTGCAGC GCGCCGACGA GGCGTTCAAG GTCTACCTGG CCGCGGTGGC CGGCGTCTTC
GTGGTGGTCG GCCTGGTGCT CAACGGCATG CTGTGGCTGC TGGTGGTGCG GCCGATCACG
CGGCTGGCGG CGCTGGCCAA CCAGGTCAGC CTGGGCGACA TGAACGCGCC CGAGTTCGCG
CAGAAGGGCC GCGACGAGGT GGCCGAACTG GCCGCGTCGT TCGCCCGCAT GCGGCGCAGC
ATGGTCGAGG CGCTCAAGCT GCTCGACGCC TGA
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| Protein sequence | MKLLWKFNLI FVLVFAAGLG VSAYVLRNLL QQQAQDEVID RARLLMEKAI AVRSYTSTHI
RPLLDTQMKY SFLPESVPAF AATEVIAALH KTYPDYSYKE ATLNPTNPRD RAVDWEVDVV
NQFRNRAELK EYIGQRQPDT GRALYIARPI RITDAACLRC HSTVDAAPRP MIERYGPANG
FGWNFNEVVG AQIVSVPMAL PLQRADEAFK VYLAAVAGVF VVVGLVLNGM LWLLVVRPIT
RLAALANQVS LGDMNAPEFA QKGRDEVAEL AASFARMRRS MVEALKLLDA
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