| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4062 |
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| Symbol | |
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| ID | 6162597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4551142 |
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| End bp | 4551744 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666840 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001793079 |
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| Protein GI | 171060730 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000158668 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCATGA AGACCCATCC GAATCCGCCT CCGTCATCCC CGGTGCGCCG TGCCCTGGCG
CGCGTGTCGT GCGCGCTGGC GCTGCTCGGT GCCGGCGTGC TCGCGGCGCA GGCCCAGTCC
GCGGCCGACA CCACCGTGCT GCGCGGCCAG GACGTCAACC CCGACAAGCT GGTCGAGCTG
CTCACGCCCG ATCCGGAGCC GGTGCTCACG CGCGGGCTCA AGGTCGACCG CGAGGCCAGC
CTGCCGGCGG CGGTGCGGCG CCCGAGCGCG TCGCTGCTGA TCACCTTCGA GACCAACTCG
GCGCGCCTCA CGCCCAGCTC GCGCCAGCAG CTCGACACCG TGGCGGCGGC GCTCAAGAGC
AATCAGCTGC AGGCCTACGG CTTCAACCTC GAAGGCCACG CCGACCCGCG CGGCCAGGCC
AGCACCAACC GCCAGCTGTC GCAGATGCGC GCCGAGAGCG TGCGCGACTA CCTGGTGGCC
ACGCACGGCA TCCCGGTCGA CCGCCTGGCG CCGATCGGCA AGGGCGACAC CGAGCCGCTC
AATACCCGGG ACGTGGCCGC ACCGGAAAAC CGCCGGGTGA CGATCGTGAC GCGGCCGCAG
TGA
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| Protein sequence | MTMKTHPNPP PSSPVRRALA RVSCALALLG AGVLAAQAQS AADTTVLRGQ DVNPDKLVEL
LTPDPEPVLT RGLKVDREAS LPAAVRRPSA SLLITFETNS ARLTPSSRQQ LDTVAAALKS
NQLQAYGFNL EGHADPRGQA STNRQLSQMR AESVRDYLVA THGIPVDRLA PIGKGDTEPL
NTRDVAAPEN RRVTIVTRPQ
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