| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4051 |
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| Symbol | |
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| ID | 6163238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4537492 |
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| End bp | 4538628 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666829 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_001793068 |
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| Protein GI | 171060719 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000160133 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGCA TCGTCATGTT CGGCGGCGGC AGCGGCAGCC GCGACATCAC CATGGCCCTG
TGCCGACAGC GCTACGAGGT CACCCGCGTG GTGCCCGCCT GGGACAGCGG CGGCAGCTCC
AGGGCCTTGC GGGCCGCGCT CGGCATCCTG GCGATGGGCG ACATCCGCCA GGCCCTGATG
ACGATGGCCC ACGGCGAAGG CCGGGTCAGC AGCGTGGTGC GCTTCTTCAA CGCCCGCCTG
TCCGAGACCT CGAGCCAGCC CGATCTGCTG GCCGAATTCG ACTTCTACGT CAGCGGCGCC
CACCCCCTGC TGGCCACGAT GGAGCCCGGC ATCCGCGGCG CGATCCTCAA CTACCTGCGC
GTGTTCCAGT CGAACATCGC CGGCGACTTC GATTTCTGCC GCGGCAGCAT CGGCAACTTC
GTGCTGACGG GGGCCTACTT CGCCCACGGT CGCGACATCA ACACCGCGAT CTTCGTGTTC
CGCAAGCTGT GCGCCATCGA CGGCCACGTG TGGCCATCGA CCGCCGACGA CACGGTCGAG
CTGCGTGCCG TGCTGCGCGA CGGCCAGGTG GTGCGCGGCC AGGAGCGCAT CACCGACCTG
AACGCCGAAC AGGCGCAGGC GGGCATCGAG CGGGTCGAGC TGCTGCACGC GGGCGACGGC
AGGCCCGCGG CTTCGCGCCC GGCGGCCAAT CCGGCGGTCC TGGAGGCGAT CGGCACGGCC
GACCTGATGC TGTTCGGCCC GGGCAGCTTC TACACCAGCA CGCTGCCGCA CCTGTCGGTG
GCGGGCATCG CCGAGGCGAT CCGCGCCGCG CCGCCGCAGG TTCCCAAGGT CTTCGTCGGC
AACATCCTCG AATGCCCCGA GACGATCGGC GGCACTGTGG CCGAGCAGGT GCGCGCGCTG
CTGCAGGCCG GCGGACCCGG CTCGCTGACC CATGTCCTGC TCAACCGCGG CTGGGTGCCG
TTCGAGCGCG TGGCCAAGGG CTTTCGCTAC CTTCACGAGG GGGTGCTGCC CGAAGGCGGG
CCCGGGCTCC TTGCCGATGA TTTCGAGGAC CCGTGGCACC GCGGCCGGCA CGACGCACCC
AAGGTGGTCG AGCTGCTCGG CGAGCTCATC ACCCGGTCCG GTCCGGCGCC GAACTGA
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| Protein sequence | MKRIVMFGGG SGSRDITMAL CRQRYEVTRV VPAWDSGGSS RALRAALGIL AMGDIRQALM
TMAHGEGRVS SVVRFFNARL SETSSQPDLL AEFDFYVSGA HPLLATMEPG IRGAILNYLR
VFQSNIAGDF DFCRGSIGNF VLTGAYFAHG RDINTAIFVF RKLCAIDGHV WPSTADDTVE
LRAVLRDGQV VRGQERITDL NAEQAQAGIE RVELLHAGDG RPAASRPAAN PAVLEAIGTA
DLMLFGPGSF YTSTLPHLSV AGIAEAIRAA PPQVPKVFVG NILECPETIG GTVAEQVRAL
LQAGGPGSLT HVLLNRGWVP FERVAKGFRY LHEGVLPEGG PGLLADDFED PWHRGRHDAP
KVVELLGELI TRSGPAPN
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