| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4040 |
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| Symbol | |
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| ID | 6160547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4525990 |
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| End bp | 4528587 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666820 |
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| Product | cyanophycin synthetase |
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| Protein accession | YP_001793059 |
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| Protein GI | 171060710 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase
[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000000142292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACCTCA CCCGCATCCG GGCCCTGCGC GGCCCCAACC TCTGGAGCCG ACACACCGCG
ATCGAAGCGA TCGTGCGCTG TGAAGGCGAC GAGGTCGACA TCTCACGGCT GGCCGGTTTC
GAGCCGCGCC TGCGCGCGCT GTTCCCGGGC ATCGGCGCGC TGCCTGCCAG CGGCCAGCGC
GGCGTGCTGT CGCTCGCCCA CGTGCTCGAA AGCGCAGCCC TGGCGCTGCA GAACCAGGCC
GGCTGCCTGG TGACATTCAG CCGCACTTCG GCCACGCTGG AGACCGGCGT CTACCAGATG
GTCGTCGAGT ACAGCGAGGA GCCGGTCGGC CGCCTGGCGC TCGAACTGGC CGAACAGCTG
GTGCGCGCCG CGCTCGAACT GGCCGGCCAA GGCAGTTTCG ACGTGACGGC CGCACTGGCC
CGCCTGCGCG AGATCGACGA GGACGTGCGC CTGGGCCCGT CCACCGGCTC GATCGTCGAC
GCCGCCGCCG CCCGCGGCAT CCCGTGGCGG CGCCTGACGC AGGGCAGCCT GGTGCAGTTC
GGCTGGGGCG CGCGCGCGCG CCGCATCTGG GCCGCCGAGG TCGACTCGAC CAGCGCGGTC
AGCGAGTCGA TCGCGCAGGA CAAGGACCTG AGCAAACGCC TGCTCGCCGC CGCCGGCGTG
CCGGTGCCGA TCGGCCGGCC GGTCACCAGC GTCGACGACG CCTGGGCCGT GGCGCAGGAG
ATCGGCCTGC CGGTGGTGCT CAAGCCGCAG GACGGCAACC AGGGCAAGGG CGTGACGGTC
AACATCGTCG ACCGCGCCCA CCTTGAAATC GCCTACGCCG CCGCCGCCGA GATCGGCGAG
GTGATGGTCG AGAAATTCCT GCCCGGCGCC GACTACCGCC TGCTGGTGGT CGGCAACCAG
CTGATCGCCG CGGCCCGGCG CGACCCGCCG CACGTCAGCG GCGACGGCGT GCACAGCGTG
CGCGAGCTGG TCGAGATCGT CAACGCCGAC CCCAGGCGCG GCGACGGCCA CGCCACCTCG
CTGACCAAGA TCCGCTTCGA CGAGATCGCC GTGGCGCGCC TGGCGATCCA GGGCCTGACG
CCCGAGTCGG TGCCTCCCAA GGGCCAGCGC GTGATCCTGC GCAACAACGC CAACCTGAGC
ACCGGCGGCA CCGCCACCGA CGTGACCGAC GACGTGCACC CCGAGGTCGC CGCGCGTGCG
GTGGCGGCGG CGCAGATGGT CGGCCTGGAG ATCTGCGGCG TCGACGTGGT CTGCGAAAGC
GTGCTGCGCC CGCTCGAGGA CCAGAGCGGC GGCATCGTCG AGGTCAATGC CGCGCCCGGC
CTGCGCATGC ACCTGTCGCC GTCCTACGGC AAGGGCCGCA ACGTCGGCGA GGCGATGATC
AACCACCTGT TCGGTGTGCC CGGCCACGGC CACGACGGCC GCATCCCGCT GGTCGCCGTC
ACCGGCACCA ACGGCAAGAC CACCGCCACC CGCCTGATCG CGCACATCCT GGCCACCAGC
GGCCTGCGGG TGGGCATGAC CAACACCGAC GGCGTCTACG TCAACGGCCG CCAGATCGAC
AGCGGCGACT GCTCGGGCCC CAAGAGCGCG CGCAACGTGC TGATGCACCC CGACGTCGAC
GCCGCGGTGT TCGAGACCGC GCGCGGCGGC GTGCTGCGCG AGGGCCTCGG TTTCGACCGC
TGCCAGGTCG CGGTGGTCAC CAACATCGGC GCGGGCGATC ACCTCGGCCT GAACTACATC
ACCACGGTCG AGGACCTGGC GGTGCTCAAG CGCGTGATCG TGCAGAACGT CGCCGCCAGC
GGCTACGCGG TGCTCAACGC CGCCGACCCG ATCTGCGCGG CGATGGCCAC CACCTGCCCC
GGCCAGGTGA TCTTCTTCGC CGCCGACCGC CAGCACCCGG TGATGGCGAC GCACCGCGCG
CAAGGCAAGC GCTGCGTGTT CGTCGACGGC GACCAGCTGG TCGCGGCCGA AGGCGCCTGG
CGCGAGAGCG TGTCGCTGCG CGACATCCCG ATCACGCGCG GCGGCCTGAT CGGCTTCCAG
GTCGAGAACG CGATGGCCGC GGTGGCCGCG GCCTGGGGCG TCGGGCTCGA CTGGGACGCG
GTGCGCCGCG GCCTGGCCAG CTTCGTCAAC GACGCCGACA ACGCGCCCGG CCGCTTCAAC
GTGCTCGACT ACCGCGGCGC CACCGTGATC GCCGACTACG GCCACAACCC CGACGCGATG
CGCGCGCTGG TGTCGGCGGT CGACGCGCTG CCGGGCAAGC GCCGTTCGGT GGTGATCAGC
GGCGCCGGCG ACCGCCGCGA CGAGGACATC CGCGAGCAGA CCCAGATCCT CGGCCAGGCC
TTCGACGACG TGATCCTGTT CCAGGACGCC TGCCAGCGCG GCCGCGAGGA CGGCGAGGTG
CTGCGCCTGC TGCGCGAAGG CCTGAGCGAC GCCACCCGCA CCCGCCGGGT CGACGAGATC
TACGGCGAGT TCATCGCCAT CGACGCGGCG CTGGAGCGGC TGGAGCCGGG CGATCTCTGC
CTGGTGCTGG TCGATCAGGT CGAGGAGGCG CTCGCCCACC TGACGCAGCG CATCAACGGC
ACGCCGGTCG CCGGCTGA
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| Protein sequence | MDLTRIRALR GPNLWSRHTA IEAIVRCEGD EVDISRLAGF EPRLRALFPG IGALPASGQR
GVLSLAHVLE SAALALQNQA GCLVTFSRTS ATLETGVYQM VVEYSEEPVG RLALELAEQL
VRAALELAGQ GSFDVTAALA RLREIDEDVR LGPSTGSIVD AAAARGIPWR RLTQGSLVQF
GWGARARRIW AAEVDSTSAV SESIAQDKDL SKRLLAAAGV PVPIGRPVTS VDDAWAVAQE
IGLPVVLKPQ DGNQGKGVTV NIVDRAHLEI AYAAAAEIGE VMVEKFLPGA DYRLLVVGNQ
LIAAARRDPP HVSGDGVHSV RELVEIVNAD PRRGDGHATS LTKIRFDEIA VARLAIQGLT
PESVPPKGQR VILRNNANLS TGGTATDVTD DVHPEVAARA VAAAQMVGLE ICGVDVVCES
VLRPLEDQSG GIVEVNAAPG LRMHLSPSYG KGRNVGEAMI NHLFGVPGHG HDGRIPLVAV
TGTNGKTTAT RLIAHILATS GLRVGMTNTD GVYVNGRQID SGDCSGPKSA RNVLMHPDVD
AAVFETARGG VLREGLGFDR CQVAVVTNIG AGDHLGLNYI TTVEDLAVLK RVIVQNVAAS
GYAVLNAADP ICAAMATTCP GQVIFFAADR QHPVMATHRA QGKRCVFVDG DQLVAAEGAW
RESVSLRDIP ITRGGLIGFQ VENAMAAVAA AWGVGLDWDA VRRGLASFVN DADNAPGRFN
VLDYRGATVI ADYGHNPDAM RALVSAVDAL PGKRRSVVIS GAGDRRDEDI REQTQILGQA
FDDVILFQDA CQRGREDGEV LRLLREGLSD ATRTRRVDEI YGEFIAIDAA LERLEPGDLC
LVLVDQVEEA LAHLTQRING TPVAG
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