| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4025 |
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| Symbol | |
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| ID | 6161695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4507599 |
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| End bp | 4508549 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666805 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001793044 |
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| Protein GI | 171060695 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000302708 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAAACCA AATGGCTTGA AGACTTCGTC AGCCTGGCCG AGACGCGCAG CTTCTCGCGC
TCGGCCCAGC TGCGACATGT CACCCAACCG GCGTTCTCGC GCCGCATCCA GGCGCTCGAG
GCCTGGGCCG GCATCGATCT GGTCGATCGC TCGTCCTACC CGACCCGCCT GACGCCGGCC
GGCCAGACGC TGCTGCCGCA GGCGGTCGAG GTGCTCGGTT CGCTGCAGGC GGCGCGCAAC
CTGATGCGCA GCCACCAGAA CTCGGCGCAG GACATGATCG AGTTCGCGGT GCCGCATTCG
CTCGCGTTCA GCTTCTTCCC GCACTGGGTG ATGGAGCTGC GTCAGCGCTT CGGCGCCTTC
AAGAGCCGGC TGATCGGCAT GAACGTGCAC GACGCCGTGA TGCAGCTGAC CGAAGGCAGC
TGCGACCTGC TGCTGGCCTA TCACCACGCC TCTCAGCCGC TGCAGCTCAA CCCCGAGCGC
TACGAGATGC TCACGCTCGG CAGCGAGACG CTGGCGCCCT ACGCGCGCGC CGATGCCGAC
GGCGAGCCGC TGTTCCGCCT GCCCGGCCAC ACGCACGAGC GGGTGCCGTA TCTGGCCTAC
GCGTCGGGCG CCTATCTGGG CCGCATGGTC GACCTGCTGC TCAAGCAGGC CAACCAGGCG
CTCTACCTCG ACCCGATCTA CGAGACCGAC ATGGCCGAAG GCCTGAAGGC GATGGCGCTC
GAGGGCCACG GCCTGGCGTT CCTGCCCGTC AGCTCGGTCA AGAAGGAATT GCGCGCCCGC
CGCCTGGTGC CGGCGGCGCC GCGTCAAAGC GGTGCACCGG CTTTCGAGGT GACCATCGAG
GTGCGGCTCT ACCGCGAGCG GCCCGAATAC GCCCGCCAGG CCAAGCCGGC GGCGCAGGCG
CTGTGGGCGT TTCTCTGCCA GGGCAAGGCC CTGGTGGCCG CGCCGGCCTG A
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| Protein sequence | METKWLEDFV SLAETRSFSR SAQLRHVTQP AFSRRIQALE AWAGIDLVDR SSYPTRLTPA
GQTLLPQAVE VLGSLQAARN LMRSHQNSAQ DMIEFAVPHS LAFSFFPHWV MELRQRFGAF
KSRLIGMNVH DAVMQLTEGS CDLLLAYHHA SQPLQLNPER YEMLTLGSET LAPYARADAD
GEPLFRLPGH THERVPYLAY ASGAYLGRMV DLLLKQANQA LYLDPIYETD MAEGLKAMAL
EGHGLAFLPV SSVKKELRAR RLVPAAPRQS GAPAFEVTIE VRLYRERPEY ARQAKPAAQA
LWAFLCQGKA LVAAPA
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